Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2396 |
Symbol | rplB |
ID | 4205476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2614815 |
End bp | 2615648 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642566945 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_699660 |
Protein GI | 110802191 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.445207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTTA AAAAGTTTAA CCCAACTACA CCATCAAGAA GACAAATGAC TATGCCAACA TTTGAAGAAG TTACTACAAA TGCACCAGAG AAGTCACTTC TTGTTTCTTT AAAGAAAACT GGTGGTAGAA ACGCACAAGG TAAAATAACT GTTAGACACC ATGGTGGTGG AGCTAAGAGA AAATATAGAA TAATAGATTT CAAAAGAAAT AAGGATGGAA TTCCAGCAAA AGTTGCTACA GTAGAGTACG ATCCAAACAG ATCAGCTTAC ATAGCACTTG TTGTTTATGC TGATGGAGAG AAGAGATACA TACTTGCTCC TGTAGGTTTA AAAGTAGGAG ATACAGTAGT ATCAGGACCA GAGGCTGATA TCAAGCCAGG TAACGCTCTT CAATTAAAAC ACATGCCAGT AGGTACTTTT GTTCATAACA TAGAGTTACA AGCTGGAAAA GGTGGCCAAA TGGTAAGATC AGCAGGTACT TCAGCTCAGT TAATGGCTAA AGAAGGAAAC TATGCTACAT TAAGATTACC ATCAGGTGAA ATGAGATACG TAAGAATCGA ATGTAAAGCT ACTGTTGGAA CAGTATCAAA CACAACTCAT GAGATCGTAA ATATCGGTAA AGCTGGTAGA AAGAGACACA TGGGATGGAG ACCAACAGTT AGAGGTTCTG TAATGAACCC TTGCGATCAC CCTCACGGTG GTGGAGAAGG TAGATCTCCT ATCGGTAGAC CAAGTCCAGT TACTCCATGG GGTAAACCAG CACTTGGATA CAAAACTAGA AAGAACAAAA AATACTCAGA TAGATTCATC ATTAAGAGAA GAAACGCTAA ATAG
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Protein sequence | MALKKFNPTT PSRRQMTMPT FEEVTTNAPE KSLLVSLKKT GGRNAQGKIT VRHHGGGAKR KYRIIDFKRN KDGIPAKVAT VEYDPNRSAY IALVVYADGE KRYILAPVGL KVGDTVVSGP EADIKPGNAL QLKHMPVGTF VHNIELQAGK GGQMVRSAGT SAQLMAKEGN YATLRLPSGE MRYVRIECKA TVGTVSNTTH EIVNIGKAGR KRHMGWRPTV RGSVMNPCDH PHGGGEGRSP IGRPSPVTPW GKPALGYKTR KNKKYSDRFI IKRRNAK
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