Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2384 |
Symbol | rplF |
ID | 4204057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2609892 |
End bp | 2610431 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642566933 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_699648 |
Protein GI | 110801640 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAGAG TAGGTAAAAT GCCTATAGCT ATCCCTGCTG GAGTAACTGT TACTGTAACA CCAGAGAACG TTGTTACAGT AAAAGGCCCT AAGGGTGAGT TAGTTAAAGC TATGCACAAA GACATTAATA TAGCTGTAGA AGATGCTCAA GTAGTTGTTA CTAGACCAAG TGACGTTAAA GAACACAGAG CACTTCACGG ATTAACTAGA GCTTTACTTA ACAACATGGT TGTTGGAGTA AGCCAAGGTT TTTCAAAAAC TTTAGAGTTA AACGGAGTTG GATACAGAGC TCAATTACAA GGAAAGAAAC TTGTTATGAA CTTAGGATAT TCACATCCAG TAGAAGTTGA AGCAGTTGAT GGAGTAGACT TCAAATTAGA CGGAACAACT AAAGTTATCG TTGAAGGTAT CGATAAAGAA AAAGTTGGAG CAGTTGCTGC TAACATCAGA TCATGGAGAA AACCTGAACC ATATAAAGGT AAAGGAATCA AGTACTCTGA TGAAGTTATA AGAAGAAAAG AAGGTAAAAC TGGTAAATAA
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Protein sequence | MSRVGKMPIA IPAGVTVTVT PENVVTVKGP KGELVKAMHK DINIAVEDAQ VVVTRPSDVK EHRALHGLTR ALLNNMVVGV SQGFSKTLEL NGVGYRAQLQ GKKLVMNLGY SHPVEVEAVD GVDFKLDGTT KVIVEGIDKE KVGAVAANIR SWRKPEPYKG KGIKYSDEVI RRKEGKTGK
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