| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2365 |
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| Symbol | truA |
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| ID | 4204444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2598029 |
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| End bp | 2598763 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642566915 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_699630 |
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| Protein GI | 110802389 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000187105 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGAATA TAAAATTAAC TATAGAATAT GATGGAACAT CTTATTTTGG GTGGCAAAAA
CAGCCTATAG GAAATACTAT TCAGCAGAAG GTAGAAGAGG CTATAAAGAA GGTTACTAAA
GAAGAGGTAG AAATATTAGG AAGTAGTAGA ACGGATTCAG GAGTCCATGC TAAGGCCTAT
GTGGCTAATT TTAAAACTAA TTCTAATATA CCAGGGAAAA ATTTTAAGGC TGCATTAAAT
TCAAAGTTAC CAAAGGATAT AGTAATAATG AATTCAGAAG AGGTAGCTGA GGATTTTCAT
GCTAGGTATA TGACTACAGG TAAAACTTAT TGTTACACAA TATTAAATAG AGAAGAACCA
CCAGCATTAG AAAGAAATTA TGTATATCAT GTTAAAAAGC AATTAGATGT TGAATCTATG
AAAGAAGCAT GTAAATACTT TTTAGGAAAA CATGACTTTA AGGCTTTTCA AAGACCAGGT
GGGACAGTTA AGACCTCTGT AAGAACAATA ACCGATATTC ACATTGAAAT AGAAGGAAAT
AAAATTAAAA TATATGTGTC GGCAGATGGT TTTTTATATA ATATGGTAAG ATTAATTGTA
GGAACATTAC TTAAAGTGGG AAGAGGAAAA GAGAAGCCAG AATATATAAA GGAAGTGATA
GATTCTGGTG ATAGAAAAAA AGCTGGAATT TGTGTTCCAC CAACAGGATT ATGCTTAGAA
AAAGTTTTTT ACTAA
|
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| Protein sequence | MRNIKLTIEY DGTSYFGWQK QPIGNTIQQK VEEAIKKVTK EEVEILGSSR TDSGVHAKAY
VANFKTNSNI PGKNFKAALN SKLPKDIVIM NSEEVAEDFH ARYMTTGKTY CYTILNREEP
PALERNYVYH VKKQLDVESM KEACKYFLGK HDFKAFQRPG GTVKTSVRTI TDIHIEIEGN
KIKIYVSADG FLYNMVRLIV GTLLKVGRGK EKPEYIKEVI DSGDRKKAGI CVPPTGLCLE
KVFY
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