Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2355 |
Symbol | nrdF |
ID | 4205269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2586132 |
End bp | 2587166 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642566905 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_699620 |
Protein GI | 110802082 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAA ATAAAAGACC TCTTTTTAAT GAGTTTGGAG ATATTGAAAC TAATAAAAAG AAAATGATAA ACGGTAATAC AACTAATTTA AATGACTTTA ATAATATGAA ATATACTTGG GTTTCAGAAT GGTACAGACA AGCAATGAAT AATTTCTGGA TACCAGAGGA AATAAACTTA GCTCAAGACT TAAAAGATTA TAAAAAGTTA ACTAAGGAAG AAAAAGCGGC ATATGATAAG ATTCTTTCTT TCTTAATATT TTTAGATTCA ATACAAACAG CTAACTTAGG AAATATAAAT AGTTATATTA CCGCTTCAGA AGTTAACTTA TGTTTAACTA TACAAGCTTT CCAAGAAGCG GTTCACTCAC AAAGCTATAG TTATATGCTA GATAGTATTT GTTCACCAGA GGAGAGAAAC GAAATATTAT TCCAATGGAA AGACGATGCT ATATTACTTC AAAGAAATAA ATTTATAGGA GACCTATATA ATAACTTCTT AGAAGACTCA AGCATAGAAA ACTTTATAAA ATCAGTAATG GCTAACTATA TTTTAGAGGG TGTTTATTTC TACTCAGGAT TTATGTTTTT CTATAATTTA GAGAGAAATG GAAAAATGCC TGGTTCAGCT CAAGAGATTA GATATATAAA CAGAGATGAA AATACTCATT TATGGTTATT TAGAAGTATA ATAAAGGAAT TAAAAGAAGA AATACCAGAA GTATTCACTA AAGAGTTAAA AGAAGAACTA AGAGAAATGA TGAGAACTGG TGTTGAACAT GAAATTGCAT GGGGACACTA TGTTATAGGT GATAATGTTA CTGGAATAAA TAAAAATCTT ATAGAAAGAT ATATAAAATA CATAGGAAAC TTAAGAGCTA AAGCTATAGG TTTAGAGCCT TTATTTGAAG GCTACAATGA GAATCCAGCA CCATGGGTAG ATTATTATGC TGATGCAAAC CAAGTAAAAA CAGACTTCTT TGAGGCGAAA TCAACAGCAT ATGCTAAAGC TGGAGCTTTA ATAGACGATC TATAA
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Protein sequence | MEINKRPLFN EFGDIETNKK KMINGNTTNL NDFNNMKYTW VSEWYRQAMN NFWIPEEINL AQDLKDYKKL TKEEKAAYDK ILSFLIFLDS IQTANLGNIN SYITASEVNL CLTIQAFQEA VHSQSYSYML DSICSPEERN EILFQWKDDA ILLQRNKFIG DLYNNFLEDS SIENFIKSVM ANYILEGVYF YSGFMFFYNL ERNGKMPGSA QEIRYINRDE NTHLWLFRSI IKELKEEIPE VFTKELKEEL REMMRTGVEH EIAWGHYVIG DNVTGINKNL IERYIKYIGN LRAKAIGLEP LFEGYNENPA PWVDYYADAN QVKTDFFEAK STAYAKAGAL IDDL
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