| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2354 |
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| Symbol | rpsD |
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| ID | 4206187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2585138 |
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| End bp | 2585731 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642566904 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_699619 |
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| Protein GI | 110803742 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAGA TGATGGGACC TCGTTTCAAA ATGTGCAGAA GACTTGGATT AAATGTAGTT
GGACATCCAA AAGCAATGAA ACGAGCTGAT AGAGGAACAA GCAGAGCAGA TAAGAAATTA
TCTGATTACG GTATTCAATT ATTAGAAAAG CAAAGATTAA GAGCTTACTA CGGTGTTATG
GAAAGACAAT TTACTAGATA CGTAGATCAA GCTTTCAATA GTAAAGAACA ACCTGGTGAG
GCTTTACTTA TGATTTTAGA ATCAAGACTT GATAATATGG TATATAGAAT GGGGTTTGCT
AGCTCAATAA GACAAGCAAG ACAAATGGTT AACCATGGAC ATTTCTTAGT AAATGGAAAG
AAAGTTAATA TACCATCTTT CAGATTAAAT ATAGGTGATG AAGTTGTTTT AAGAGAAAAA
TCAAGAAAAA CAGAAATGTT TGTAAACAAC TTTAAAGATA GCATAGGAAG TGAAGTTCCT
TACATAAGTA AAGAAGAAGA TAACTTTAAA GGGATTTTCG CTAGAAAGCC TAAGAGAGAA
GAAATTCCAA TAACAATACA AGAACAATTA ATAGTTGAAT TCTATTCTAA ATAA
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| Protein sequence | MAKMMGPRFK MCRRLGLNVV GHPKAMKRAD RGTSRADKKL SDYGIQLLEK QRLRAYYGVM
ERQFTRYVDQ AFNSKEQPGE ALLMILESRL DNMVYRMGFA SSIRQARQMV NHGHFLVNGK
KVNIPSFRLN IGDEVVLREK SRKTEMFVNN FKDSIGSEVP YISKEEDNFK GIFARKPKRE
EIPITIQEQL IVEFYSK
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