| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2353 |
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| Symbol | |
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| ID | 4205534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 2582960 |
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| End bp | 2584966 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566903 |
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| Product | phosphocarrier HPr/sensory box protein/sigma-54 dependent transcriptional regulator |
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| Protein accession | YP_699618 |
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| Protein GI | 110803061 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATTCAA GAGAATTGAT TATAAAGACG CCCTTAGGAT TACACACTAG ATACTCTGCT
ATGATTGTTA ATAAGGCTTC TGAAATAGAG TCTAAGTATA AAGTTAAACT CTATATAAAA
AAAGAATCTT ATACAGATTG GCTTGGAATA AGTATGCTTG CAATACTTTC TCTTAAGGTG
TTGCCTAATG AAAGTATATT AATTGGATCT AAAAATGAAG GAATGATTGA AAAGTTAGCT
GTTCAATCTC TTCTTGAGTT TATTGATAAA AACATAAATA ACCCTATTGA ATCTGAAGAT
AGTGAAATAG ATGAAATAAT AGATGCTAGC ATAGTAGCTA ATGAGCAGGT TCTTGAAAGT
TTACCAATAG GTATTGTTGT TATAGATATA GATCAAAATA TAATAACAAT TAATCAATAT
GCTTTAAGAT TTATTGGATG CAATAAAAAA GATGTTAAAG GAAAAAAGAT TAATGAAGTT
ATTCCATCAT CTCAGCTTCC TCATGTTATG CTTAGTAATT TAAAAAAGTA TGGTTCAACT
CTTCATATAA ATAACAGAGT TGGCTTAGTA AATAGCTCTC CTCTTTTCAT AAACGATAAG
ATTATAGGGG CTATAAGTGT TATTCAAGAT GTATCTGATA TTATAGGTAT GAAAGAAATA
AATGAGAAAT TTACTAAGAT ACTTGAAAAC TCACAGGATA TGATTTGCTT TGTAGATGAA
AATGGCATAA TAAATTATTT AAATCCTGCA TATATTAAAA ACTTTTCTAA AGTTAGTTCT
GATGTTATAG GAAAAAGTAT TTTTGATATT GCTCCTAATG GACTTAGAGC TAAAGTATTT
AAAGAAAAAA CTTTATTAAA AGATGTAATT CATAAGAAAA ACGGTATAAA TGTTATAAGT
ACTATTGATC CTTTATTTAT TGATGGTCAG TTTAAAGGAG TTATTTCTAC TTCTAGACCA
GTTAGTTTAA TTAAAGAACT TATGTCAAAA CTAAATAAGT CTGAACAAGA ATTAGATTAT
TATAAAAATG AGTTTTTAAG ACAGTTATCT AAAAATTCTT CTTTTAATAA TATTATAGGT
TCAACTAGAA CTCTAAAGGA TATAATGTAC ATGTGTCAAA AAGCTTCAGA AACTACATCA
ACTGTTCTTA TTCGTGGTGA AAGTGGTACA GGTAAGGAAC TTATTGCAAA GGCTATACAC
AATAATAGTA ATAGAAAAAA TAAGCCTTTT GTAAGGGTTA ACTGTGCTTC AATTCCTGAA
AATCTCTTAG AAAGTGAATT ATTTGGATAT GAAAAGGGAG CTTTTACTGG GGCAGTTCAA
AGCAAACCTG GTAAATTTGC TATTGCTGAT ACAGGTACTA TATTCTTAGA TGAAATAGGT
GATATGCCCT TATCAATGCA AGTTAAACTC CTTAGAGTTT TACAAGAAAG AGAGATTGAA
AGTGTTGGAG GAATAACTCC TAAAAACATT GATGTAAGAG TTATTGCTGC AACTAATAGA
AATTTAGAAG AAATGATTGA AGATGGTTCC TTTAGAGAGG ATCTTTATTA CAGACTTAAT
GTCTTAGGTA TTAATCTTCC TCCACTTAGA GAACGTAAAG AAGATATTCC TGAACTTGCC
GAACATTTTA TAACTAAGCT AAATAAAAAA TTACATAAAA CTATATTAGG AATAAAACAA
GATGCCCTTA ATCTACTAAT TGAGTATTCT TGGCCTGGAA ATATACGTGA GCTTGAAAAT
ATAATGGAAA GAGCAATAAA TCTTTGTGAT GGAGATTATA TAGATAGTTC TTATCTGCCT
TCATATTTAA AGCCAGTTGA ATCAAAGTCT TTTAATTTAA ATATTGATAT TGATCATATA
CTTCCTTTTG AAGAATATGA AAAACAAATA ATAGAAGCAG CTATGAAGAA GTACAAATCC
TTTAATAAGG CTGGAAAAGC TTTAGGATTA ACTCATAGAA CAGTTTCTTT AAAATGTAAA
AAGTATAATA TAGAGGTAAA AAAATAA
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| Protein sequence | MYSRELIIKT PLGLHTRYSA MIVNKASEIE SKYKVKLYIK KESYTDWLGI SMLAILSLKV
LPNESILIGS KNEGMIEKLA VQSLLEFIDK NINNPIESED SEIDEIIDAS IVANEQVLES
LPIGIVVIDI DQNIITINQY ALRFIGCNKK DVKGKKINEV IPSSQLPHVM LSNLKKYGST
LHINNRVGLV NSSPLFINDK IIGAISVIQD VSDIIGMKEI NEKFTKILEN SQDMICFVDE
NGIINYLNPA YIKNFSKVSS DVIGKSIFDI APNGLRAKVF KEKTLLKDVI HKKNGINVIS
TIDPLFIDGQ FKGVISTSRP VSLIKELMSK LNKSEQELDY YKNEFLRQLS KNSSFNNIIG
STRTLKDIMY MCQKASETTS TVLIRGESGT GKELIAKAIH NNSNRKNKPF VRVNCASIPE
NLLESELFGY EKGAFTGAVQ SKPGKFAIAD TGTIFLDEIG DMPLSMQVKL LRVLQEREIE
SVGGITPKNI DVRVIAATNR NLEEMIEDGS FREDLYYRLN VLGINLPPLR ERKEDIPELA
EHFITKLNKK LHKTILGIKQ DALNLLIEYS WPGNIRELEN IMERAINLCD GDYIDSSYLP
SYLKPVESKS FNLNIDIDHI LPFEEYEKQI IEAAMKKYKS FNKAGKALGL THRTVSLKCK
KYNIEVKK
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