Gene CPR_2348 details

Gene Information

• Locus tag: CPR_2348
• ID: 4205229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 2577580
• End bp: 2578182
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 642566898
• Product: spore-cortex-lytic enzyme, putative
• Protein accession: YP_699613
• Protein GI: 110801636
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3773] Cell wall hydrolyses involved in spore germination

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA GTATTTATAA TTACTTTATC TTCACCTTCG CCTTATTAAT TATCACTACA 
CTTAATGAGA AAGAAGTTTT AGGGCTTTCT CTATCAAATG AGCATGTAAC CAAAAATAAT 
TATATAGAAT TAACAGAAAT GGCTTCTAAT TCGCCAAATC CTGAAGCAGA ACAAAGTAGT 
AATTCAAATA ATGAAGTTAT TGCTGTATTC CAAAGTTCAA ACTCTACAAT TTCACTTACT 
AAAGATGACA TATATTTAAT GTCTCAAGTA GTTTATGCTG AAAGTAAAGG TGAACCTTTT 
GATGGAAAAA TAGCCGTTGC ATCAGTAATA CTTAATAGAA CAACGGATTC TCAATTTCCA 
GATACAATTC ATGGAGTAAT AACACAGAAA AATGCCTTTT CTTGTGTTAG AAATGGCAAA 
ATTGACGTAG TCCCTGATGG TGATAGCTAT AATGCCGTTC TAAAAGCCAT AGAAGGATAT 
GACCCAACAG ATGAGGCATT ATATTTTTAT AACCCTAAAA TCGCTACATG CTCGTGGATG 
AAAGGCGTCG AAAAGACAGG AGAAAAAATT ATAGGTCAAC ATGTATTTTT TAATGTTACC 
TAA 

 

Protein sequence

MKKSIYNYFI FTFALLIITT LNEKEVLGLS LSNEHVTKNN YIELTEMASN SPNPEAEQSS 
NSNNEVIAVF QSSNSTISLT KDDIYLMSQV VYAESKGEPF DGKIAVASVI LNRTTDSQFP 
DTIHGVITQK NAFSCVRNGK IDVVPDGDSY NAVLKAIEGY DPTDEALYFY NPKIATCSWM 
KGVEKTGEKI IGQHVFFNVT