| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2346 |
|---|
| Symbol | |
|---|
| ID | 4206139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2575529 |
|---|
| End bp | 2576386 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642566896 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_699611 |
|---|
| Protein GI | 110803772 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1624] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00159] conserved hypothetical protein TIGR00159 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGAAT TAATAATGAT ATTTACAAAT AGTTTAAAGG ATATATCTAT TTGGTCCATC
ATAGATATAT TAATTGTAGC TTTTATATTT TATAGGGGAT ATATATTAAT AAAAGAAACA
AGGGCAGAGC AATTATTAAA GGGAGTAATA TTATTATTGA TTTTAATTCC TATAAGCTAT
GTTTTAAGAC TTCAAATGTT AAATTTTATA TTAACAAAAA CATTGACCAT AGGTGTTTTA
TCAATAATTA TTATTTTCCA ACCAGAAATA AGAAGAGCAT TAGAACATAT AGGAAGTACT
GCTTTTGATG ATTTTCATGT TATTCAAGAT GATCAAAAAT TAGAGGAAGT TATTGATCAA
CTTATAGTAG CAGTAGAGGA TATGGCTGAA ACTAAAACTG GTGCCTTAAT AGCTATAGAG
CAAGGGACAG GATTAGCAGA AATAATTTCT ACGGGAACCC AATTAGATGC AGTAATAACT
TCTGCATTAA TAGAGAATAT ATTCTTTAAG AACACTCCAT TACATGATGG AGCAACTATA
ATTAGAAATG ATAGAATCGT TTCAGCAGGT TGTGTCTTAC CATTAACAAA TAATAATACT
ATAAATAAAA AACTTGGTAC TAGACATAGA GCTGCTATAG GGTTATCTGA AATATCAGAT
GCTTTAGTTA TTGTTGTTTC AGAAGAAACA GGAGCTATAT CTTTAGCTGT AAAAGGTAGA
TTAACAAGAA ATTATGATGG TAAAAAATTA AAAAATATAT TATTAAAAGT TATGAGAAAT
AGACGTGATA AGAGAGGGAA AACTTATGGA GAGAAGGTGA AAATATGCTT AAAAAAATTG
AAGGAAAGAA TTTCTTAG
|
|---|
| Protein sequence | MQELIMIFTN SLKDISIWSI IDILIVAFIF YRGYILIKET RAEQLLKGVI LLLILIPISY
VLRLQMLNFI LTKTLTIGVL SIIIIFQPEI RRALEHIGST AFDDFHVIQD DQKLEEVIDQ
LIVAVEDMAE TKTGALIAIE QGTGLAEIIS TGTQLDAVIT SALIENIFFK NTPLHDGATI
IRNDRIVSAG CVLPLTNNNT INKKLGTRHR AAIGLSEISD ALVIVVSEET GAISLAVKGR
LTRNYDGKKL KNILLKVMRN RRDKRGKTYG EKVKICLKKL KERIS
|
|---|
| |