Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2302 |
Symbol | ispF |
ID | 4205508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 2528655 |
End bp | 2529125 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642566853 |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_699577 |
Protein GI | 110802631 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0549282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAG GAATGGGATA TGATGTTCAT AAATTAGTTG AAAATAGAGA TTTAATATTA GGTGGAGTAA AAATTCCTTA TGAAAAAGGA CTTTTAGGCC ATTCAGATGC TGATGTATTA TTACACGCAA TAATGGATTC ACTTTTAGGA GCAGCGGCTC TAGGAGATAT AGGAAAGTAT TTCCCAGATA CAGATCCTAA ATATAAAGGT GCTGATAGCA TAAAACTTCT AGAATTTGTA GGTGAACTTT TAAATAAAAA TAACTACAAA ATATCAAATA TAGATGCAAC TATAATAGCT CAAAGACCAA AAATGGCTCC TCATATACCT ACTATGAGAG AAAATATAGC TAAAGCATTA AATATAGACT TAGATAAAAT AAATGTTAAA GCAACTACTG AGGAAGGACT TGGTTTTACT GGTACTGGAG AAGGAATCTC ATCTCAAAGT ATTTGTCTTT TAATAAAGTA A
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Protein sequence | MRIGMGYDVH KLVENRDLIL GGVKIPYEKG LLGHSDADVL LHAIMDSLLG AAALGDIGKY FPDTDPKYKG ADSIKLLEFV GELLNKNNYK ISNIDATIIA QRPKMAPHIP TMRENIAKAL NIDLDKINVK ATTEEGLGFT GTGEGISSQS ICLLIK
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