Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2288 |
Symbol | |
ID | 4204348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2512436 |
End bp | 2513074 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642566839 |
Product | redox-sensing transcriptional repressor Rex |
Protein accession | YP_699563 |
Protein GI | 110801673 |
COG category | [R] General function prediction only |
COG ID | [COG2344] AT-rich DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.307621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGA AAAAAGGCAT ATCTATGGCT GTAATAAAAA GATTGCCTAA ATACCATAGA TATTTACAAG AATTAATGGA AAATGATATT GATAGAATAT CTTCAAAAGA GTTAAGCGAA AAAATAGGCT TTACGGCTTC TCAAATAAGA CAGGATCTTA ATTGTTTTGG AGATTTTGGG CAACAGGGAT ATGGATACAA TGTAAAAGAG TTATATAATA ACATAGGAAA CATATTAGGA CTTACAAGAG ACTATAATAC AGTTATAATC GGAGCTGGTA ATATAGGTCA GGCAATTGCA AATTACAATA GTTTCAACAG ATTAGGATTT AAATTAAAAG GTATTTTTGA TGCTAATCCT AGAATGTTTG GAATAAAAAT AAGAGATATT GAAATACAAG ATGTTGAAAA ATTAAAAGAT TTCGTAAAAG AAAATGATAT TGAAATAGGT ATAATCTGTG TTCCAAGAAC AAATGCTCAA AAGGTATGTA ATGAACTTGT TGAAGGTGGA ATTAAAGGTA TATGGAACTT TGCACCTATA GATTTAGATG TTCCAAAAGA TATAAGAGTA GAAAATGTAC ATTTAAGTGA AAGTATGATG ACTTTAGTGT ATCTTTTAAA TCATAATGAT GTAAAATAA
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Protein sequence | MEKKKGISMA VIKRLPKYHR YLQELMENDI DRISSKELSE KIGFTASQIR QDLNCFGDFG QQGYGYNVKE LYNNIGNILG LTRDYNTVII GAGNIGQAIA NYNSFNRLGF KLKGIFDANP RMFGIKIRDI EIQDVEKLKD FVKENDIEIG IICVPRTNAQ KVCNELVEGG IKGIWNFAPI DLDVPKDIRV ENVHLSESMM TLVYLLNHND VK
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