Gene CPR_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2287 
Symbolcrt 
ID4205621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2511395 
End bp2512177 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content33% 
IMG OID642566838 
Product3-hydroxybutyryl-CoA dehydratase 
Protein accessionYP_699562 
Protein GI110803399 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.867439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA ATAATGTAAT CTTTGAAAAA GAGGGAAACA TTGGGGTTTT AACAATTAAC 
AGACCTAAGG CATTAAATGC ATTAAACTCA GAAACTTTAA AAGACTTAGA TACTGCTATA
GATCATATAG AAAAACAAGA TGATATATAT GTTGTTATTT TAACAGGTGC TGGAGATAAA
GCATTTGTTG CAGGAGCTGA TATATCAGAA ATGAAAGATT TAAATGAAGA AGAGGGCAAA
GAATTTGGAC TTTTAGGTAA TAAAGTGTTT AGAAGATTAG AAAATTTAGA CAAGCCTGTA
ATCGCTGCTA TAAACGGTTT CGCTTTAGGT GGTGGATGTG AAATTTCTAT GGCTTGTGAC
ATAAGAATAG CAACTACAAA GGCCAAGTTT GCTCAACCTG AGGTTGGATT AGGAATAACT
CCAGGATTTG GTGGAACTCA AAGATTACCA AGAATAGTTG GACCTGGTAA GGCTAAAGAA
CTTATTTACA CAGGAGACAT GATAAAAGCT GATGAAGCTT TAAGAATTGG TTTAGTAAAT
AAGGTTGTTG AACCAGAGAA TTTAATGGAA GAAGCAATGG CATTAGCTAA GAAGATATCT
AATAATGCAC CAATAGCTGT TAAGTTATGT AAAGATGCAA TTGATAGAGG AATGCAAGTT
GATATAGATT CAGCAGTAGT TATAGAAGCT GAAGATTTTG GAAAATGTTT TGCTACAGAA
GATCAAACAG AAGGTATGAG TGCTTTTGTA GAGAGAAGAG AAAAGAACTT TAAAAACAAG
TAA
 
Protein sequence
MELNNVIFEK EGNIGVLTIN RPKALNALNS ETLKDLDTAI DHIEKQDDIY VVILTGAGDK 
AFVAGADISE MKDLNEEEGK EFGLLGNKVF RRLENLDKPV IAAINGFALG GGCEISMACD
IRIATTKAKF AQPEVGLGIT PGFGGTQRLP RIVGPGKAKE LIYTGDMIKA DEALRIGLVN
KVVEPENLME EAMALAKKIS NNAPIAVKLC KDAIDRGMQV DIDSAVVIEA EDFGKCFATE
DQTEGMSAFV ERREKNFKNK