Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2287 |
Symbol | crt |
ID | 4205621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2511395 |
End bp | 2512177 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642566838 |
Product | 3-hydroxybutyryl-CoA dehydratase |
Protein accession | YP_699562 |
Protein GI | 110803399 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.867439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTAA ATAATGTAAT CTTTGAAAAA GAGGGAAACA TTGGGGTTTT AACAATTAAC AGACCTAAGG CATTAAATGC ATTAAACTCA GAAACTTTAA AAGACTTAGA TACTGCTATA GATCATATAG AAAAACAAGA TGATATATAT GTTGTTATTT TAACAGGTGC TGGAGATAAA GCATTTGTTG CAGGAGCTGA TATATCAGAA ATGAAAGATT TAAATGAAGA AGAGGGCAAA GAATTTGGAC TTTTAGGTAA TAAAGTGTTT AGAAGATTAG AAAATTTAGA CAAGCCTGTA ATCGCTGCTA TAAACGGTTT CGCTTTAGGT GGTGGATGTG AAATTTCTAT GGCTTGTGAC ATAAGAATAG CAACTACAAA GGCCAAGTTT GCTCAACCTG AGGTTGGATT AGGAATAACT CCAGGATTTG GTGGAACTCA AAGATTACCA AGAATAGTTG GACCTGGTAA GGCTAAAGAA CTTATTTACA CAGGAGACAT GATAAAAGCT GATGAAGCTT TAAGAATTGG TTTAGTAAAT AAGGTTGTTG AACCAGAGAA TTTAATGGAA GAAGCAATGG CATTAGCTAA GAAGATATCT AATAATGCAC CAATAGCTGT TAAGTTATGT AAAGATGCAA TTGATAGAGG AATGCAAGTT GATATAGATT CAGCAGTAGT TATAGAAGCT GAAGATTTTG GAAAATGTTT TGCTACAGAA GATCAAACAG AAGGTATGAG TGCTTTTGTA GAGAGAAGAG AAAAGAACTT TAAAAACAAG TAA
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Protein sequence | MELNNVIFEK EGNIGVLTIN RPKALNALNS ETLKDLDTAI DHIEKQDDIY VVILTGAGDK AFVAGADISE MKDLNEEEGK EFGLLGNKVF RRLENLDKPV IAAINGFALG GGCEISMACD IRIATTKAKF AQPEVGLGIT PGFGGTQRLP RIVGPGKAKE LIYTGDMIKA DEALRIGLVN KVVEPENLME EAMALAKKIS NNAPIAVKLC KDAIDRGMQV DIDSAVVIEA EDFGKCFATE DQTEGMSAFV ERREKNFKNK
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