| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2272 |
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| Symbol | |
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| ID | 4206358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2496285 |
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| End bp | 2497976 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566824 |
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| Product | secretion system protein E |
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| Protein accession | YP_699548 |
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| Protein GI | 110803429 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTAGTT ATCAGAAAAA GCGTTTAGGA GATATACTAA TTGAATCGGG AAAGCTTACA
GAGGATAGGC TTAAAGAAGC ATTATTGATT CAGAAGCAAG TTGGCAAGAG GCTTGGAGAG
ATATTAGTTG AACAAAACTT TGTTACTGAA GAGGATATAA TAGAAGTTTT AGAAAAACAA
TTAAATATTG AAAGAGTAAA TCTTGAAATT ATAACAATAG ATAGAAGAGC TATAAAGATG
ATTTCGGAAA ATGTTTGTAG AAAGCATTTA ATAGTTCCGT ATGAAATAGA TGATAATACC
ATAAAGGTTG CAATGGCAGA TCCCTTAGAT ATAGTTGCAA TAGATGACGT TGAGATTTCT
ACGGGTTTAA ATGTGCGTCC GTATATAGCT GTAAAACAAT CTATTCAAAG AACTATAGAT
ATATATTATT CAAACCAAAA GGTTTTATTA GCAGCGGAAG AATTAACAAA AGCTTCTGAT
GAAGAAAGTA ATGAACTTAA TTTAGACAAA ATTGAGGAAA TAGATAACTT AGATAATGCT
CCTATTGTAA AAATGATAGA GTATGTTATT AAAAATGCAG TTGAGGAAAG AGCTAGTGAT
ATACATATTG AAACTTATGA AAATATATTA AGAATTAGAT ATAGAATAGA TGGTAAGTTA
CATACAATAT CTACTTTGCC AGTAGATACT CTAGCTCCTT TAGTTACTCG TGTTAAAATC
CTAGCTAACT TAGATATATC AGAGAAAAGA CTTCCTCAAG ATGGAAGAAT TCTTACTAAG
GTTGGAGATA AGCAAATAGA CTTAAGGGTA TCTATTCTTC CTATGATAAC AGGAGAAAAG
ATAGTTATAA GAATAATAAA TAAGGAAAAT TTCATAATTT CTAAGGAAGG ACTTGGACTG
AAAAATTTTG AGCTTTCTCT GCTAGACAAA ATAACAAAGC ATTCTAATGG AATAATCCTT
GTTACTGGTC CTACAGGGAG TGGTAAAACA ACAACACTCT ATACTATTTT AAATGAGCTA
AACACAGAAA GTAAAAATAT TATTACAATA GAAGATCCTG TTGAAGTATC AATTGAAGGA
ATTAACCAAG TTAACGTCAA TACTAAAGTT GGCTTAACAT TTGCAACTGG ATTAAGATCT
ATATTAAGAC AAGACCCTGA TACCATAATG GTTGGGGAAA TAAGAGATAC TGAAACGGCT
CAAATAGCAA TAAGATCAGC TATTACAGGT CACTTAGTTT TATCAACTTT ACATACTAGT
GATGCTCCAT CTAGTGTTTT AAGATTAGAA GATATGGGAG TTCAAAGATA TTTGATTGCA
AATGCTATTA AGGGAGTTAT AGCTCAAAGA CTTGTTAGAA AAATTTGTCC AAATTGTGGA
CAAACATATG AAGCTACACC ATATGAAAAA GAAATATTAA ATATAGATGT AAATGAAGAA
GTAATACTTC GTAGAGGAAA AGGGTGTGCT TATTGTAATA ATACTGGCTA TGTAGGTAGA
ATGGGTATTT ATGAAATTAT GGAAGTAACT AAGGAACATA GAGATGCTAT TTTAGAAAAT
AAAAGTGCAG ATATTCTTAA GGAAATTTCA ATTAAGCATG GTATGAGAAC TCTTGGACAA
TCATGTAGAA GTTTAGTCTT AGAGGGGAAT ACCACAGTTG AAGAAATGTT AAATATAACT
TATGATATGT AA
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| Protein sequence | MISYQKKRLG DILIESGKLT EDRLKEALLI QKQVGKRLGE ILVEQNFVTE EDIIEVLEKQ
LNIERVNLEI ITIDRRAIKM ISENVCRKHL IVPYEIDDNT IKVAMADPLD IVAIDDVEIS
TGLNVRPYIA VKQSIQRTID IYYSNQKVLL AAEELTKASD EESNELNLDK IEEIDNLDNA
PIVKMIEYVI KNAVEERASD IHIETYENIL RIRYRIDGKL HTISTLPVDT LAPLVTRVKI
LANLDISEKR LPQDGRILTK VGDKQIDLRV SILPMITGEK IVIRIINKEN FIISKEGLGL
KNFELSLLDK ITKHSNGIIL VTGPTGSGKT TTLYTILNEL NTESKNIITI EDPVEVSIEG
INQVNVNTKV GLTFATGLRS ILRQDPDTIM VGEIRDTETA QIAIRSAITG HLVLSTLHTS
DAPSSVLRLE DMGVQRYLIA NAIKGVIAQR LVRKICPNCG QTYEATPYEK EILNIDVNEE
VILRRGKGCA YCNNTGYVGR MGIYEIMEVT KEHRDAILEN KSADILKEIS IKHGMRTLGQ
SCRSLVLEGN TTVEEMLNIT YDM
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