| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2271 |
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| Symbol | |
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| ID | 4206307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2495053 |
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| End bp | 2496258 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642566823 |
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| Product | type II secretion system protein F |
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| Protein accession | YP_699547 |
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| Protein GI | 110803628 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAATT TTAAATATAA AGCTATTAAT TCAGAAGGGC AAAGAATAGA AGGTTCTCAA
AGTGCTGATT CTGAAAGCCA AGTTAGGGAA ATGCTTTTAT CAAATCAATA TTATCCTCTA
AGTATAGAAA AAGAAAATAG TAAAAATAAA ATCAGTTTTT CTTTTAATCG TAAGGTAAAG
CTTAAGGACA TAGCAATATT TTGTAGACAG TTTTATGTTA TGTTAGATTC TGGATTGTCT
ATTGGTAAGG CTTTAAATAT ATTAATAGAG CAAGGTGAGA AGCCAAAGAT TAGGGAAGCC
TTAATTGGAG TAAATGGAGA TTTAAAAAGA GGGGAAACTC TAGCAAGCTC CATGAGAAAA
AGAAAAGATG TTTTTCCAAA CTTACTTACT AGCATGATTG ATGCCGGTGA GAGAAGTGGT
AATTTAGATA TAATCTTAAA AAGAATGTCT GAGTACTATG AAAAAGAGAC AAAGATAAGA
GGAAAGATTA AAAGTGCTAT GATTTATCCA ATAGTTCTTG GAGTGGTAGC TATTATTGCT
ATTACTTTTA TTCTTACCTT TGTAATGCCA ACCTTTGTAC AAATGTTTGA AGAAAATAAT
GTAGATCTTC CAATGTCAAC CAAGATGGTT CTTGGGACAA GCAAAATGTT AGGTAAGTAT
GGAATAATAA TTTTTTTAAT TTTAGTAACA GCAATTATAT TACTTGGCAA ATATTTAAAG
AGTGAAGAGG GTCAATACAA GTTAAGTATA ATAAACTTAA AAATTCCAGT GATAAAGAAA
TTAACTCAAA AAATAATAGT TTCTAGATTT ACAAGAACAA TGGGAATAGT ATCATCAAGT
GGAATGTCCT TAGTAACCTC TCTAGAAATA GTTGCCTCTG TAGTTGGAAA TAAAATTGCA
GAGAAGGAAT TACTAAAAGT AAAAGAAAAG GTCTTAAAAG GTGAGGGGTT AGGAGATTCA
ATAATGAAAA TAAAAATCTT CCCACCAATG CTTGCTTCCA TGGTTAAGGT TGGAGAGGAA
GCAGGTTCGC TAGATAGCAT ATTAGATAAA ACAGCAGATT TTTATGATGA TGAACTAGAA
AGAGAAATAC AAACAGCAAC AGCCTTAATA GAGCCAGCAA TGATAGTTGT TATGGGAATA
ATTATAGGAT TTCTACTAAT TTCAATATTA ACACCTATGT TTAAAATGTA TAACAGTATA
GGTTAA
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| Protein sequence | MANFKYKAIN SEGQRIEGSQ SADSESQVRE MLLSNQYYPL SIEKENSKNK ISFSFNRKVK
LKDIAIFCRQ FYVMLDSGLS IGKALNILIE QGEKPKIREA LIGVNGDLKR GETLASSMRK
RKDVFPNLLT SMIDAGERSG NLDIILKRMS EYYEKETKIR GKIKSAMIYP IVLGVVAIIA
ITFILTFVMP TFVQMFEENN VDLPMSTKMV LGTSKMLGKY GIIIFLILVT AIILLGKYLK
SEEGQYKLSI INLKIPVIKK LTQKIIVSRF TRTMGIVSSS GMSLVTSLEI VASVVGNKIA
EKELLKVKEK VLKGEGLGDS IMKIKIFPPM LASMVKVGEE AGSLDSILDK TADFYDDELE
REIQTATALI EPAMIVVMGI IIGFLLISIL TPMFKMYNSI G
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