| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2264 |
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| Symbol | |
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| ID | 4206019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2487323 |
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| End bp | 2487913 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 23% |
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| IMG OID | 642566816 |
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| Product | prepilin peptidase-dependent |
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| Protein accession | YP_699540 |
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| Protein GI | 110803885 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.369354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATT TAAAATTTAA AAGAAAAGGG CTTTCTCTTA TAGAATTAGT TGTGGCATTA
TCCTTAATAG CAATAATATT AATGATAGTT GGTCCATTTT TCATTTCAAA TTATGTAACT
TTAGATAAAA CAAGCAATCA AATAGATTTT CAAAGGGAAG CAAAGGCCAT AATGAATTAT
TTTACTGACT CAGCTATGGA AGCATCTAAT ATAGAAAGCT TAACTAATAT TAAAAATGAG
GTTCTTTCAA ATAATAATTA TACTGAGAGT CTAAAAAAGA ATTCTTTAAA ATCAAAAGAG
GGCTATCTTA AACTAACTTT TAATAATAGT AAAAATAAAA ATGAACATAC AACATTTATA
TTAAAAGATA AATCATTATA TATGAAGAAG AATGATTCGG AAGAATTTAA AATAGGAGAT
TTAGTTAGTA GCATTGAATT AACTTCTTTA ACAGAAGAAT CAACACAAGA TAAAGAAGAA
ATCAATAATT TTAAAAATGC TAATGCTATT AAAATTGAAA TTACATTTGA TACTAAAAAG
AATACACCAT ATAAAGTAAG CAATATATTA ACCTTTAGAA ATAAAAATTA A
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| Protein sequence | MKNLKFKRKG LSLIELVVAL SLIAIILMIV GPFFISNYVT LDKTSNQIDF QREAKAIMNY
FTDSAMEASN IESLTNIKNE VLSNNNYTES LKKNSLKSKE GYLKLTFNNS KNKNEHTTFI
LKDKSLYMKK NDSEEFKIGD LVSSIELTSL TEESTQDKEE INNFKNANAI KIEITFDTKK
NTPYKVSNIL TFRNKN
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