Gene CPR_2255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2255 
Symbol 
ID4204395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp2472268 
End bp2473245 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content33% 
IMG OID642566807 
Productoligopeptide ABC transporter, ATPase component 
Protein accessionYP_699531 
Protein GI110801585 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAA CATTAGTAGA ATTTAAAAAT CTTGAAACTC ACTTTCATAC AGGTGAGGGA 
ATTGTTAAAG CGGTAAATAA CGTTAGTTTT AAAATAAAAG AAGGGGAGAC AGTTTGTGTA 
GTTGGAGAAT CTGGATGCGG AAAATCTGTT ACTGCCATGT CTCTTATGAG ATTAATACCA 
AGTCCTCCTG GAAAAATAGT TGGAGGAGAA ATTCTTTTTG AGGGAAAAGA TGTTTTAAAG 
TTCACAGAGC AAGAACTTAT GGATATGAGA GGAAATGATA TATCAGTTAT TTTCCAAGAA 
CCTATGACAT CATTAAACCC AGTATTTAAA ATAGGAGATC AAATTTGTGA AGCAATAATT 
CTTCATCAGC ATTTATCAAA AGAAGAAGCT GAAAAGAAAG CTATAGAAGT TTTAAAAATA 
ATTGGTATAG CTAGAGCAGA AGAAATAATG AAATCTTATC CTCACGAATT ATCAGGAGGA 
ATGAGACAAA GAATTATGAT TGCTATGGCA GTTTGTTGTA ATCCTAAGCT TTTAATAGCT 
GACGAGCCTA CAACTGCTCT CGATGTTACA ATTCAAGCAC AAATTCTAGA TCTTATGAGA 
GATATTAAAG AGAAATTAAA TACATCAATA TTATTAATAA CACATGACTT AGGAGTAGTT 
GCTGAAATGG CTGACTATGT TGTTGTAATG TATGCTGGTA AGGTTATTGA GGAAGCGCCA 
GTTTTAGAGC TTTTTAAAAA TCCTCTTCAT CCATATACAC AAGGTTTACT TAAATCTAAG 
CCATCAGTTA ATGGAAATGA AACTAGACTT TATTCAATAC CAGGACAAGT TCCTAATCCA 
GTAGGTATGC CTGATAATTG TTACTTTAAT GAGAGATGTG ATAGATGTAT GGAAAAATGT 
AAGGATGTTC AACCTACTCT TGTTGATGTA GGAAATAGAC ACAAAGTTTC ATGCTGGTTA 
TATAAGGAGG GAAAGTAG
 
Protein sequence
MGKTLVEFKN LETHFHTGEG IVKAVNNVSF KIKEGETVCV VGESGCGKSV TAMSLMRLIP 
SPPGKIVGGE ILFEGKDVLK FTEQELMDMR GNDISVIFQE PMTSLNPVFK IGDQICEAII 
LHQHLSKEEA EKKAIEVLKI IGIARAEEIM KSYPHELSGG MRQRIMIAMA VCCNPKLLIA 
DEPTTALDVT IQAQILDLMR DIKEKLNTSI LLITHDLGVV AEMADYVVVM YAGKVIEEAP 
VLELFKNPLH PYTQGLLKSK PSVNGNETRL YSIPGQVPNP VGMPDNCYFN ERCDRCMEKC 
KDVQPTLVDV GNRHKVSCWL YKEGK