Gene CPR_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2254 
Symbol 
ID4205443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2471299 
End bp2472267 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content32% 
IMG OID642566806 
Productoligopeptide ABC transporter, ATPase component 
Protein accessionYP_699530 
Protein GI110802178 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATA ATACAGTTTT AAAAGTTGAA AATTTGAAAA AATACTTTCC GATTAAAGCA 
GGAGTTTTTT CTAAGACAGT TGGACATGTA AAAGCTGTTG ATGGAGTAAG TTTTACTATA
GATAAGGGTG AAACTTTAGG ATTAGTTGGA GAATCAGGTT GTGGAAAATC AACAACAGGA
AGAGCAATTT TAAGATTATT TGAAAAAACA GATGGAAATG TATATTTTGA AGGGAAAGAT
ATTTTTGCTC TTAAAAAGAA AGAACTTAGA GATTTAAGAC CAAAAATGCA AATGATATTC
CAAGATCCAT ATTCATCATT AAATCCTAGA TTATCAGTAG ATTCTTTAGT AGGAGAGGCT
CTTTTAAGTC ATAAGTTATG TAGTAAAGAT GAATTGCCTG AAAGAGTAGC TAAAACTATA
GAAAGATGTG GACTTGCTAG ATATCATATG AAAAGATATC CACATGAATT CTCAGGTGGA
CAAAGACAAA GAATAGGTAT AGCAAGAGCC TTAATTTTAA ATCCAAGTTT TATAGTTGCA
GATGAACCTG TTTCAGCACT AGATGTTTCT ATACAATCAC AGATTGTAAA CTTAATGATG
GACTTACAAG AAGAAATGGG ATTTTCATAT CTTTTTATAT CTCATGATTT AAGTATAGTA
AAGCATATTT GTCATAAAAT AGGTGTAATG TATTTAGGTA GCTTAGTTGA ATTAGCTCCT
AAAAATGAAC TTTATGATAA TCCATTGCAT CCATATACAA AGGCATTATT ATCAGCAGTT
CCAATACCAG ACCCTACAAT TAAGAGGGAG AGAATAATAT TAAAGGGTGA TATTCCTTCA
CCAGCTAATC CACCAAGTGG CTGTAAGTTC CATACTAGAT GTCCATATGC TATGGATAAA
TGTAAGAATG AAGCGCCAGA ATATAAGTGT GTTGGAAAAG ATCACTTTGT TGCATGTCAC
TTAGTTTAA
 
Protein sequence
MADNTVLKVE NLKKYFPIKA GVFSKTVGHV KAVDGVSFTI DKGETLGLVG ESGCGKSTTG 
RAILRLFEKT DGNVYFEGKD IFALKKKELR DLRPKMQMIF QDPYSSLNPR LSVDSLVGEA
LLSHKLCSKD ELPERVAKTI ERCGLARYHM KRYPHEFSGG QRQRIGIARA LILNPSFIVA
DEPVSALDVS IQSQIVNLMM DLQEEMGFSY LFISHDLSIV KHICHKIGVM YLGSLVELAP
KNELYDNPLH PYTKALLSAV PIPDPTIKRE RIILKGDIPS PANPPSGCKF HTRCPYAMDK
CKNEAPEYKC VGKDHFVACH LV