| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2209 |
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| Symbol | |
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| ID | 4206329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2439283 |
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| End bp | 2440698 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 642566759 |
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| Product | sensor histidine kinase HpkA |
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| Protein accession | YP_699509 |
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| Protein GI | 110803361 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTA TAAAAACTAG GCTAATGAAA AATTTTTTAG TTCTTTTATT ATCAACTATT
ATTATAGTTT CAGCCATGTT TTTGATTTTT ATTTCTAGAT ATTATTATCA AAATACAGAG
GAAATATTAT TAAGTCAAAT TAATATATCT GTAGATTTTT ATAAAAGATA TTTGTCAAAT
GTTAGTCTAG AAGAAAATGT TTATGAAGAT GTAGATATAT TTTGGAAGCA AACGGATGCA
CAAGTTCAAA TTTATAATTT AAAGGGTCAT TTAATAATGG ATTCCATAGG TTTAGAGCCT
AAAGAATATA AAACACCTGT AGATGTAAAG AGGGCTTTAG AGGGAGATAT ATCAAAATGG
ATTGGAACAG TGCCAGATTA TACTGGTAAG GTAATGGCTA TTTCAGCACC GCTTAGAAAT
TCTTCAAATG AAATTGTAGG GGTTATTAGA TATATAAGTT CACTTAGGAA TGTGGATAAT
TTTATATTAA ATTTCTTTTT AGTATTTTTA GTAATAGGAA TAACAGTTTT AGCTATTGGT
ATAATTTTAA GTTATTTTTT AGCTAATAGC ATAGTAAATC CAATTACAGA ATTAATAAAA
GTTTCAGAAC AAATGGCTAA GGGAAACTTG AAAGTGAGAA ATAGGATTGT TACTAATGAT
GAAATTGAAA AGCTAGCTGA TAGCCTTAAT ATAATGGCAG AGGAAATTGA AAATAGAGAA
ATGTTAAAAA ATGAGTTTAT TTCTTCGATT TCTCATGAGC TTAGAACACC ATTAACATCA
ATAAAAGGTT GGGCAATAAC TTTAAATAAT GATTTTACAG ATAGGGAAAC TTTAAAAATG
GGCTTTGACA TAATTGAAAA AGAAGCTGAT AGATTAAGTA ATATGGTAGA GGAGTTATTA
GATTTTTCAA AGTTTGTTAG TGGAAAAATA AAATTAAAAT ATGAAGAAAT AAACTTAAAA
GAATTTATAG AGTACTTAAG GTTGTATATG AATCCTCGTG CAGAAAGAGA GCATAAAGAA
CTTATATTAA AAGGTATTAC AGAAGACTTT ATAATTGTAG GGGATAAAGA TAGATTAAAG
CAAGTATTTA TAAATATAAT AGATAATGCT TTTAAATTCA CTCATGAAAA TGAAAAGATA
ATAATAGAGT TTTTATATGA TGAAGAAGGA ATATATATAA ATATAATTGA TACTGGATGC
GGAATAAGTA AGGAAGAGTT GCCTAGAGTA AAAGAGAAAT TTTATAAGGG AAAAAATTCA
AAGTCACAAA ATGGTATAGG GTTATCAATA TGTGATGAAA TTATAGCTTT ACATGAAGGC
AATTTAGAGA TTTATAGTGA ATTAGGTAAG GGAACGAAAG TAGTTATATA TTTACCTAAG
AAATTAATCA GGAGTGTTGA AGATGATTTA AATTAA
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| Protein sequence | MKSIKTRLMK NFLVLLLSTI IIVSAMFLIF ISRYYYQNTE EILLSQINIS VDFYKRYLSN
VSLEENVYED VDIFWKQTDA QVQIYNLKGH LIMDSIGLEP KEYKTPVDVK RALEGDISKW
IGTVPDYTGK VMAISAPLRN SSNEIVGVIR YISSLRNVDN FILNFFLVFL VIGITVLAIG
IILSYFLANS IVNPITELIK VSEQMAKGNL KVRNRIVTND EIEKLADSLN IMAEEIENRE
MLKNEFISSI SHELRTPLTS IKGWAITLNN DFTDRETLKM GFDIIEKEAD RLSNMVEELL
DFSKFVSGKI KLKYEEINLK EFIEYLRLYM NPRAEREHKE LILKGITEDF IIVGDKDRLK
QVFINIIDNA FKFTHENEKI IIEFLYDEEG IYINIIDTGC GISKEELPRV KEKFYKGKNS
KSQNGIGLSI CDEIIALHEG NLEIYSELGK GTKVVIYLPK KLIRSVEDDL N
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