Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2193 |
Symbol | |
ID | 4204871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 2421710 |
End bp | 2422837 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642566743 |
Product | glycosyltransferase |
Protein accession | YP_699493 |
Protein GI | 110801920 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00106475 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAT GTATTGATGG AAGAGCAGCT ACCTTATACC GAGGTACTGG AATTGGTAAC TACACTTATC AAATAATAAA TAATCTACAC CAGATAGATT TTTTAAATGA ATATAACATA CTTACTCCAG AAGCATCCTC TCTAAAATTA CCTAAAAAGA ATAACTTTAA TTATTTATCC TCAAGTACAA ATGATAAAAA AAACTTTTGG GAATTTATAA ATACAAAAAA TCCTAAAGAA AATATTATAG GTGATGTATA TCATATTCCT CAAAATGGTA TAGGCTTTTC AAAACCTAAT GATATAAAGA CCGTAATTAC CCTACATGAT ATTATCCCTA TGAAAATGCC TGATACAGTT AGTGAAACAT TCTTAAAAAT TTTTAATGAA AATATACAAA ATATTTTAGA TAACACAGAT GGAATTATTA CAGTTTCTAA TTTTTCTAAA GAAGATATAA GTAAAACTTT TTCTTACCCA AAGGAAAAAA TATTTGTTAC TCATTTGGCT GCTGAAGAAA TATATACCCC ATTAAATAAA TTTCACTCAT CTCAATATCT AAAAAAACAC TATGGTATAG ATAGGGATTT TTTATTATAT GTAGGTGGTT TTAGCCCTAG AAAAAATATT TTAGGACTTA TAGATGCCTT TAACTTAGTA AAAAATTCTT ATAAAAGAGA TTTAAAGCTT GTTATTATAG GAACTAAGGG ACCTTCATAT GAAATTTACA GAAAAAAAGT AGATGAGTTA AATTTATCTT CCTCTGTTAT TTTTACTGGA TTTATTCCTA TAGATGATAT GCCTATATTC TATAGTGCTA GTAAAGCTTT AGTTTATCCT TCTTTTTATG AAGGATTTGG ACTACCTCCT ATAGAATGCA TGGCCTGCGG TACTCCTGTA ATAGCATCTA ATTTAACCTC AATGCCTGAG GTATGCCAAG ATGCTGCTCT TTTAGTTGAT CCTTATGATG TTGATGAAAT AAAGGAAAAT ATACTAACTT TATTAAATAA CCATAAATTT TATTCCCTTA TGATTTATAA AGGGCTAAGT CATTCAAGTA AATTTAATTG GAAAAAAACT GCTTATAATA CACTTGAGGT CTACAAACAT ATTTATTCAC AAATTTAA
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Protein sequence | MKICIDGRAA TLYRGTGIGN YTYQIINNLH QIDFLNEYNI LTPEASSLKL PKKNNFNYLS SSTNDKKNFW EFINTKNPKE NIIGDVYHIP QNGIGFSKPN DIKTVITLHD IIPMKMPDTV SETFLKIFNE NIQNILDNTD GIITVSNFSK EDISKTFSYP KEKIFVTHLA AEEIYTPLNK FHSSQYLKKH YGIDRDFLLY VGGFSPRKNI LGLIDAFNLV KNSYKRDLKL VIIGTKGPSY EIYRKKVDEL NLSSSVIFTG FIPIDDMPIF YSASKALVYP SFYEGFGLPP IECMACGTPV IASNLTSMPE VCQDAALLVD PYDVDEIKEN ILTLLNNHKF YSLMIYKGLS HSSKFNWKKT AYNTLEVYKH IYSQI
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