| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2188 |
|---|
| Symbol | cphB |
|---|
| ID | 4203992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2416268 |
|---|
| End bp | 2417095 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642566738 |
|---|
| Product | cyanophycinase |
|---|
| Protein accession | YP_699488 |
|---|
| Protein GI | 110801720 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4242] Cyanophycinase and related exopeptidases |
|---|
| TIGRFAM ID | [TIGR02069] cyanophycinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGGTA GTAGTAAAAA AAATTTAATA ATAATAGGTG GAGCAGAAGA TAAAAAGGGT
GAAAAGATTA TATTAAATTT TGTAGCAGAT AAATTTAAAG AATCGGAAGG AATTATGTTG
ATTGCAACAA TAGCTACAGA ATCACCTAAT ATAGTCATAG AACAGTATAA AAATATATTT
TCAAGTATGG GAATAAGAGA AATCAAAGAG CTTCGTGTTA TAGAAAGAGA AGAAGCTTTT
GATGAAAATA ATATTTCTTT AGTAAATGAG GCTTCAGTAA TATTTTTTAC TGGAGGAGAT
CAGCTTAGAA TAACTAGTTT AATTGGGGGA ACTCCTCTTT ATGATACATT ACAAAAAAGA
AGTAATGAAG GATGTTATTT TGTAGGAACA TCAGCAGGGG CTTCTGTCAT GAGTGATGTT
ATGATAGTTG GTGGAGAAGA AGGGGAATCA CCTAAAAAGA GTTCACTAAA TATGTCTGCA
GGATTAGGTT TAATTAAAAA TACTCTTATA GATCAACACT TTGCTCAAAG AGGAAGGATA
GGTAGATTAT TATCAGGAGT GTGCCAAAAT CCTGAAGTTT TAGGAATTGG TATAGATGAA
GACACTGCTA TAGTAATTAA TGATGATGAA TTGACTGTAA TTGGTAGTGG AGCAGTTTAT
TTTGTAGATG GAAGAAATAT TGAATATACA AATGTATCTG AGAAAAGACA AGATGAGGTA
TTTAGTATAT TTAATATAAA GTTACATGTA TTAACAGCAG GCAAAAAAAT GAATTTATCA
ACTAGGGTGC CTTTTGAGGA GGAAAGAAAT AAAAATGAAG ATAAATAA
|
|---|
| Protein sequence | MKGSSKKNLI IIGGAEDKKG EKIILNFVAD KFKESEGIML IATIATESPN IVIEQYKNIF
SSMGIREIKE LRVIEREEAF DENNISLVNE ASVIFFTGGD QLRITSLIGG TPLYDTLQKR
SNEGCYFVGT SAGASVMSDV MIVGGEEGES PKKSSLNMSA GLGLIKNTLI DQHFAQRGRI
GRLLSGVCQN PEVLGIGIDE DTAIVINDDE LTVIGSGAVY FVDGRNIEYT NVSEKRQDEV
FSIFNIKLHV LTAGKKMNLS TRVPFEEERN KNEDK
|
|---|
| |