| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2181 |
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| Symbol | rho |
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| ID | 4206046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2406818 |
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| End bp | 2408278 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642566731 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_699481 |
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| Protein GI | 110803874 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATATAG AACAATATGA AAATATGACT TTAGTTCAGC TAAAAGAGCA GGCTAAAGAA
TTAGGAATAA AAAATATAAG TAAAAAGAAA AAAAGCGAAT TAATTGAGGA ATTAAAAGCT
GAATTCAATA AACAAAATAG CAATACTAAA GTAATACATA AAGACGGTGT TATTTTAAGA
GAAAAAATAT CTCAAAAAGA GCAAGGTGGA AACAAAGAAA GTTTTTCTGG TGAAAGGGTA
GTTAGAAATA GTAATAATTA TAATAACAAT AATAGTAATT ATAATAATTC AAATGATGAA
GGAAAAAAAG AGCAGTTAAA GGACATGATA AGTTCATCAG ACTCTGCTAA GGGAATACTT
GAAATATTAG ATAATAATAA TTTTGGCTTT TTAAGATGTA GAAATTATTT AACAAGTGAA
GATGATATAT ATGTTTCTCC ATCACAAATA AGAAGATTTG GATTAAGAAC TGGGGACGAA
GTCCAAGGTA AAGTTAGAAT ACCAAAGGAT GGAGAAAAGT TTAAAGCTTT ACTTTATGTA
GAGAGAGTAA ATGGTGAAAG TCCTGAAAAA GCAGTTGGAA GAAAGAAGTT TGAAGAGTTA
ACACCAATAT ATCCAAAAGA GAGATTAAGA CTTGAGACTG AGAATGGAAG AGATTTAAGT
TCAAGACTTA TGGATATAAT TTGTCCAATA GGTAAGGGAC AAAGGGGGAT GATAGTTGCA
CCACCTAAGG CTGGAAAAAC AACTCTTTTA AAAAGAATAG CTCAAAACAT ATCAAAGAAT
AATCCTGAAG TTAAACTTAT AGTACTTTTA ATAGATGAAA GACCAGAAGA AGTAACGGAT
ATGAAGAGAA GTATAGATGG AGAAGTAATC TATTCAACTT TTGATGAAGA ACCACAAAAC
CATGCTAAAG TTTCAAGTAT AGTATTAGAA AGAGCTAAAA GAATGGTTGA ACAAGGAAGA
GATGTAGTTA TATTAATGGA TTCTTTAACA AGATTATCAA GAGCCTATAA CTTAACAGTT
ACTCCATCTG GAAGAACTTT ATCAGGAGGA TTAGATCCAG GGGCACTTAT AATGCCTAAG
AAATTCTTTG GAGCAGCTAG AAATTTAGAA GAGGGCGGAA GTTTAACAAT TTTAGCAACT
TCTTTAGTTG ACACAGGAAG TAGAATGGAT GATATGATTT TTGAAGAGTT TAAGGGTACT
GGAAATATGG AAGTACACTT AGATAGAAAG CTTCAAGAGA GAAGAATATT CCCAGCTATA
GATATTTATA AATCTGGTAC TAGAAAAGAA GATTTATTAT TTAATGAAGA AGAAAGAGAA
GCATCATATA AAATAAGAAG AGTATTACAA AAGGAAAATA ATATAGAGGA TGTAGCTGAA
AAGCTTATAA ATTTATTATC AAAAACAAAA AATAATAAAG AGTTTTTACA AGTTGTTTTA
AAAAGCAATT TAGAAAATTA A
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| Protein sequence | MNIEQYENMT LVQLKEQAKE LGIKNISKKK KSELIEELKA EFNKQNSNTK VIHKDGVILR
EKISQKEQGG NKESFSGERV VRNSNNYNNN NSNYNNSNDE GKKEQLKDMI SSSDSAKGIL
EILDNNNFGF LRCRNYLTSE DDIYVSPSQI RRFGLRTGDE VQGKVRIPKD GEKFKALLYV
ERVNGESPEK AVGRKKFEEL TPIYPKERLR LETENGRDLS SRLMDIICPI GKGQRGMIVA
PPKAGKTTLL KRIAQNISKN NPEVKLIVLL IDERPEEVTD MKRSIDGEVI YSTFDEEPQN
HAKVSSIVLE RAKRMVEQGR DVVILMDSLT RLSRAYNLTV TPSGRTLSGG LDPGALIMPK
KFFGAARNLE EGGSLTILAT SLVDTGSRMD DMIFEEFKGT GNMEVHLDRK LQERRIFPAI
DIYKSGTRKE DLLFNEEERE ASYKIRRVLQ KENNIEDVAE KLINLLSKTK NNKEFLQVVL
KSNLEN
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