| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2179 |
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| Symbol | rpmE |
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| ID | 4205643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 2405294 |
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| End bp | 2405542 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642566729 |
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| Product | 50S ribosomal protein L31 |
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| Protein accession | YP_699479 |
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| Protein GI | 258676980 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0254] Ribosomal protein L31 |
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| TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00985809 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTTAGCA ACATTTTTTT ATTTTTGAAA GAGGTGAATT ACATGAGACA AGGCATACAT
CCAGAATACC ATCACGATAC AGTGGTTAAG TGTGCATGTG GAAACACTTT CACAACTGGT
TCAGTTAAAC CAGAACTTAA AGTTGAAATA TGCTCTAAGT GCCACCCATT CTTCACAGGA
AAACAAAAAA TCGTTGATGT TGGCGGAAGA GTTGATAAAT TCAACAAGAG ATTTAATCTT
AATAAATAA
|
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| Protein sequence | MFSNIFLFLK EVNYMRQGIH PEYHHDTVVK CACGNTFTTG SVKPELKVEI CSKCHPFFTG
KQKIVDVGGR VDKFNKRFNL NK
|
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| |