Gene CPR_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2173 
Symbol 
ID4205866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp2399196 
End bp2399645 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content32% 
IMG OID642566723 
Productribose-5-phosphate isomerase B 
Protein accessionYP_699473 
Protein GI110802734 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0388966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG CAATTGGTTG CGATCATGGT GGATTTAATT TAAAAAACAC AGTGATAAAA 
CATTTAGAAG AAAAAGGTAT TGAGGTAAAA GATTTCGGTA CATACAGCAC AGATTCTTGT 
GATTACCCTG ATATATCTAT ACAGGTTGCA GAAGCTGTAG CTAAAAAAGA ATTTGAATAT 
GGTATATTAA TTTGTGGAAC TGGTATAGGA ATATCTATAG CAGCAAATAA AGTTCCAGGA 
ATAAGAGCAG CATTATGTTC TGATACATTT AGTGCTCATG CAACAAGACA ACATAACAAT 
GCAAATATTC TAGCTATGGG TGAGAGAGTT GTAGGACCAG GATTAGCTTT AGATATAGTT 
GATACTTTCT TAAATTCAGA ATTTGAAGGT GGAAGACACC AAAATAGAAT AGATAAAATA 
ACAGCTATTG AAGAAAAGTA TTCAAAATAA
 
Protein sequence
MKIAIGCDHG GFNLKNTVIK HLEEKGIEVK DFGTYSTDSC DYPDISIQVA EAVAKKEFEY 
GILICGTGIG ISIAANKVPG IRAALCSDTF SAHATRQHNN ANILAMGERV VGPGLALDIV 
DTFLNSEFEG GRHQNRIDKI TAIEEKYSK