Gene CPR_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2171 
Symbol 
ID4204897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2397304 
End bp2398458 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content30% 
IMG OID642566721 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_699471 
Protein GI110801946 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.527797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA TAAAAGTTTT AACTATCTTT GGAACAAGAC CGGAAGCTAT AAAAATGGCT 
CCATTAGTAA AAGAATTAGA AAAAAGACCG GAAATAGAAT CAAAGGTTTG TGTAACTGCT
CAACATAGAG AAATGTTAGA TCAAGTTTTA GAACTATTTG ATATAAAGCC TGACTTTGAT
CTAGACATAA TGAAAAATCG TCAAACTCTT ACTGGAATAA CAAATAGAGT TTTAGAAGGA
TTAGAAAAAG TATTTACAGA AGAAAAACCA GATATGATAC TTGTACATGG TGATACTACA
ACAACTTTTG CTGGAGGATT AGCAGCATTC TATCAACAAA TAAGAGTAGG CCATGTTGAA
GCTGGACTTA GAACTTTTGA TAAATATTTC CCATTCCCAG AGGAAATGAA TAGAAAGTTA
ACAGGCGCTT TAGCTGATTT ACACTTTGCT CCAACTAAAG GATCAAAAGC TAACCTTTTA
AGAGAAGGAA TAAATGAAAA TGACATAAAA ATTACAGGTA ACACTGTAAT CGATGCTATG
GAACATACTG TAGAAGATAA CTATGTTTTT GAAAATGATG AATTAAATAA AATAGATTTT
GAAAACAAAA AAGTTATAAT GATAACTGCA CATAGAAGAG AAAATTGGGG AGAAGGTATA
GAAAATATCT GTACAGCTTT AAATAAAATA GTTGAAGATA ATAAAGATGT TGAATTAGTT
TACCTTGTTC ACTTAAATCC AGTTGTAAAA GATGTTGTTT ATAAAAATCT TGATGGTAAA
GAAAGAGTAC ATCTTTTACC ACCACTTGAT ACAAAAGAAA CTCATAACTT AATGAATAAA
TGCTTTATGG TTATGACTGA TTCAGGTGGA TTACAAGAAG AAGCTCCTCA TTTAGGAAAA
CCAGTATTAG TTTTAAGAGA TGTTACAGAA AGACCAGAAG CTGTTCAATC AGGAACAGTT
AAATTAGTCG GTACTGATGT TGAAAAAATA TTAGAAGAAG CTAATTCGCT TATAAATGAT
GAAAAAGCTT ATGCAAAAAT GAGTAAAGCT ATAAATCCAT ATGGAGATGG TAAGGCTTCT
GAAAGAATAG TAAAAGCTAT TTTAAATTAC TTTGGAAAAA ATGATGAAGA AGTAGAAGAG
TTTATAAGCA AATAA
 
Protein sequence
MEKIKVLTIF GTRPEAIKMA PLVKELEKRP EIESKVCVTA QHREMLDQVL ELFDIKPDFD 
LDIMKNRQTL TGITNRVLEG LEKVFTEEKP DMILVHGDTT TTFAGGLAAF YQQIRVGHVE
AGLRTFDKYF PFPEEMNRKL TGALADLHFA PTKGSKANLL REGINENDIK ITGNTVIDAM
EHTVEDNYVF ENDELNKIDF ENKKVIMITA HRRENWGEGI ENICTALNKI VEDNKDVELV
YLVHLNPVVK DVVYKNLDGK ERVHLLPPLD TKETHNLMNK CFMVMTDSGG LQEEAPHLGK
PVLVLRDVTE RPEAVQSGTV KLVGTDVEKI LEEANSLIND EKAYAKMSKA INPYGDGKAS
ERIVKAILNY FGKNDEEVEE FISK