Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2171 |
Symbol | |
ID | 4204897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2397304 |
End bp | 2398458 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642566721 |
Product | UDP-N-acetylglucosamine 2-epimerase |
Protein accession | YP_699471 |
Protein GI | 110801946 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0381] UDP-N-acetylglucosamine 2-epimerase |
TIGRFAM ID | [TIGR00236] UDP-N-acetylglucosamine 2-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.527797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGA TAAAAGTTTT AACTATCTTT GGAACAAGAC CGGAAGCTAT AAAAATGGCT CCATTAGTAA AAGAATTAGA AAAAAGACCG GAAATAGAAT CAAAGGTTTG TGTAACTGCT CAACATAGAG AAATGTTAGA TCAAGTTTTA GAACTATTTG ATATAAAGCC TGACTTTGAT CTAGACATAA TGAAAAATCG TCAAACTCTT ACTGGAATAA CAAATAGAGT TTTAGAAGGA TTAGAAAAAG TATTTACAGA AGAAAAACCA GATATGATAC TTGTACATGG TGATACTACA ACAACTTTTG CTGGAGGATT AGCAGCATTC TATCAACAAA TAAGAGTAGG CCATGTTGAA GCTGGACTTA GAACTTTTGA TAAATATTTC CCATTCCCAG AGGAAATGAA TAGAAAGTTA ACAGGCGCTT TAGCTGATTT ACACTTTGCT CCAACTAAAG GATCAAAAGC TAACCTTTTA AGAGAAGGAA TAAATGAAAA TGACATAAAA ATTACAGGTA ACACTGTAAT CGATGCTATG GAACATACTG TAGAAGATAA CTATGTTTTT GAAAATGATG AATTAAATAA AATAGATTTT GAAAACAAAA AAGTTATAAT GATAACTGCA CATAGAAGAG AAAATTGGGG AGAAGGTATA GAAAATATCT GTACAGCTTT AAATAAAATA GTTGAAGATA ATAAAGATGT TGAATTAGTT TACCTTGTTC ACTTAAATCC AGTTGTAAAA GATGTTGTTT ATAAAAATCT TGATGGTAAA GAAAGAGTAC ATCTTTTACC ACCACTTGAT ACAAAAGAAA CTCATAACTT AATGAATAAA TGCTTTATGG TTATGACTGA TTCAGGTGGA TTACAAGAAG AAGCTCCTCA TTTAGGAAAA CCAGTATTAG TTTTAAGAGA TGTTACAGAA AGACCAGAAG CTGTTCAATC AGGAACAGTT AAATTAGTCG GTACTGATGT TGAAAAAATA TTAGAAGAAG CTAATTCGCT TATAAATGAT GAAAAAGCTT ATGCAAAAAT GAGTAAAGCT ATAAATCCAT ATGGAGATGG TAAGGCTTCT GAAAGAATAG TAAAAGCTAT TTTAAATTAC TTTGGAAAAA ATGATGAAGA AGTAGAAGAG TTTATAAGCA AATAA
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Protein sequence | MEKIKVLTIF GTRPEAIKMA PLVKELEKRP EIESKVCVTA QHREMLDQVL ELFDIKPDFD LDIMKNRQTL TGITNRVLEG LEKVFTEEKP DMILVHGDTT TTFAGGLAAF YQQIRVGHVE AGLRTFDKYF PFPEEMNRKL TGALADLHFA PTKGSKANLL REGINENDIK ITGNTVIDAM EHTVEDNYVF ENDELNKIDF ENKKVIMITA HRRENWGEGI ENICTALNKI VEDNKDVELV YLVHLNPVVK DVVYKNLDGK ERVHLLPPLD TKETHNLMNK CFMVMTDSGG LQEEAPHLGK PVLVLRDVTE RPEAVQSGTV KLVGTDVEKI LEEANSLIND EKAYAKMSKA INPYGDGKAS ERIVKAILNY FGKNDEEVEE FISK
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