| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2170 |
|---|
| Symbol | |
|---|
| ID | 4204143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2395858 |
|---|
| End bp | 2397036 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642566720 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_699470 |
|---|
| Protein GI | 110802673 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGAGG TAGTTATTGC AAGTGCAGTA AGAACAGCAT TAGGTTCATT TGGTGGTTCA
TTAAAGGATG TTCCTGCTGT AGATTTAGGA GCTTTAGTTA TTAAAGAAGC TTTAAATAAA
GCTGGTGTAA AACCAGAATG TGTTGATGAA GTTTTAATGG GAAATGTAAT TCAAGCTGGA
TTAGGACAAA ACCCTGCAAG ACAAGCAGCT GTAAAAGCTG GTTTACCAGT TGAAATTCCT
TCAATGACAA TAAATAAAGT TTGTGGTTCA GGTTTAAGAT GTGTGGCTTT AGCAGCTCAA
ATGATAAAAG CAGGAGATGC TGACGTAATA GTAGCTGGTG GTATGGAAAA CATGTCACAA
GGGCCATATG TTTTAAAAAC TGCAAGATTT GGTCAAAGAA TGGGCGATGG AAAAATGGTT
GATGCTATGG TCAATGACGC TTTAACAGAT GCATTTAATG GATACCATAT GGGTATAACT
GCTGAAAATA TAGCAGAACA ATGGGGATTA ACTAGAGAAA TGCAAGATGA ATTTGCTGCA
AATTCTCAAA TTAAAGCCGA AGCAGCTATA AAGAATGGAA AATTCAAAGA TGAAATAGTT
CCAGTAGTAA TTCCAAAAAG AAAAGGTGAT CCAATAGTAT TTGATACTGA TGAATTCCCT
AGATTTGGAA CAACTGCTGA AAAATTAGCT AAGTTAAGAC CAGCATTCAA AAAAGATGGT
ACAGTTACAG CTGGTAATGC ATCAGGTATA AATGATGGTG CTGCTGCGTT AGTTGTTATG
AGTGCTGAAA AAGCAAAAGA ATTAGGAGTA ACTCCAATTT GTAAAATAGT TTCTTATGGT
TCAAAAGGAT TAGATCCTTC AATTATGGGA TATGGCCCAT TCTATGCTAC TAAAAAAGCT
TTAGAAGGAA CTGGATTAAC AGTTGCAGAT CTTGACTTAA TAGAAGCAAA TGAAGCTTTT
GCAGCTCAAA GTTTAGCAGT TGCTAAAGAT TTAGAATTTG ATATGAGTAA AGTTAATGTA
AATGGTGGAG CTATAGCTTT AGGACATCCA GTAGGAGCTT CAGGGGCTAG AATATTAGTT
ACATTAATTC ACGAAATGAT GAAGAGAGAT GCTAAGAGAG GTTTAGCAAC ACTTTGTATA
GGTGGAGGAA TGGGAACTGC TTTAATAGTA GAAAGATAA
|
|---|
| Protein sequence | MREVVIASAV RTALGSFGGS LKDVPAVDLG ALVIKEALNK AGVKPECVDE VLMGNVIQAG
LGQNPARQAA VKAGLPVEIP SMTINKVCGS GLRCVALAAQ MIKAGDADVI VAGGMENMSQ
GPYVLKTARF GQRMGDGKMV DAMVNDALTD AFNGYHMGIT AENIAEQWGL TREMQDEFAA
NSQIKAEAAI KNGKFKDEIV PVVIPKRKGD PIVFDTDEFP RFGTTAEKLA KLRPAFKKDG
TVTAGNASGI NDGAAALVVM SAEKAKELGV TPICKIVSYG SKGLDPSIMG YGPFYATKKA
LEGTGLTVAD LDLIEANEAF AAQSLAVAKD LEFDMSKVNV NGGAIALGHP VGASGARILV
TLIHEMMKRD AKRGLATLCI GGGMGTALIV ER
|
|---|
| |