Gene CPR_2166 details

Gene Information

• Locus tag: CPR_2166
• Symbol: atpF
• ID: 4205327
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2393224
• End bp: 2393688
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642566716
• Product: F0F1 ATP synthase subunit B
• Protein accession: YP_699466
• Protein GI: 258676976
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATAT TAGCTACAAT CATTAACTTT ATAATATTAA TTCTTATACT AAAACATTTT 
TTCTGGGACA AAATCAAAAG AGCCATCGAT GCAAGACAAG AAGCTATAGA TGAAACTATC 
TTAAAGGCCG ATGAAGATGC AGAAAAAGCA AGAAGATTAA GATTAGATAA TGAAAGAATT 
CTTAAATCTG CTAAAGAAGA TGGTAGAAAG CTTAGAGAAG AACAGAAAAA AGAAGCTGAT 
AGAATTTATA AAGAAATAGT TGATGACGCT CACAGAGAAG CTGAGTCTAT AATAAATAGA 
GCTAATATTG AAATTCAAAG AGAAGAAGAA AAAGTAAAAT ATGAGTTAAA GCAACAAGTA 
GTTGATATTT CTGTAATGCT TTCAGAGAAA GCACTTGGAG AATCTATTGA TGAATCTAAA 
CATAGAGAGT TAATAAATGA TTTTATTGAA AAGGTAGGTA TCTAA 

 

Protein sequence

MRILATIINF IILILILKHF FWDKIKRAID ARQEAIDETI LKADEDAEKA RRLRLDNERI 
LKSAKEDGRK LREEQKKEAD RIYKEIVDDA HREAESIINR ANIEIQREEE KVKYELKQQV 
VDISVMLSEK ALGESIDESK HRELINDFIE KVGI