Gene CPR_2165 details

Gene Information

• Locus tag: CPR_2165
• Symbol: atpH
• ID: 4205631
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2392682
• End bp: 2393221
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 642566715
• Product: F0F1 ATP synthase subunit delta
• Protein accession: YP_699465
• Protein GI: 110803409
• COG category: [C] Energy production and conversion
• COG ID: [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
• TIGRFAM ID: [TIGR01145] ATP synthase, F1 delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGAAT ATTTAGATCG TAGATATGCC TTAGCTCTAT ATGAAGTTGC AGAAGAAAAG 
AATAAAGTTG AAGAATACTT AAATGATTTA AGAGAAATCT GTGAGATCAT TTATGGAAAT 
AATGAACTTT ATGAAGTAAT AAAACATCCT CAAATTAGTA CTGTAAGAAA GAAAAAGACT 
TTCAGAAACA TATTTGAAGG AAAAATAGAT GATGAGTTAC TTTCATTTTT AATGGTTCTT 
ATAGAAAAAG ATAGAATACT TTATCTAAGA GAAAAATTAA AAGAAATGGA AAAAATTCAT 
CTAGAAAGAA ACAATACTTT ACTTGCAGAA GTAAAAAGTG TTGTTCCATT AACAGAAGAT 
GAAGTTACAA GACTTGTAGA GAAGTTAGAA AATAAATACT CAAAGAAAAT TTTATTAAAG 
CAAGAAATAG ATAGAAGTAT CATTGGAGGA CTTTATGTCA GAGTTGGCGA TGATGTTATA 
GATGGTACTG TTAAATCTAG ACTTGACGAT ATGAAACAGA TAATGCTTAA GAGAGAATAG 

 

Protein sequence

MYEYLDRRYA LALYEVAEEK NKVEEYLNDL REICEIIYGN NELYEVIKHP QISTVRKKKT 
FRNIFEGKID DELLSFLMVL IEKDRILYLR EKLKEMEKIH LERNNTLLAE VKSVVPLTED 
EVTRLVEKLE NKYSKKILLK QEIDRSIIGG LYVRVGDDVI DGTVKSRLDD MKQIMLKRE