| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2162 |
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| Symbol | atpD |
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| ID | 4204316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2388836 |
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| End bp | 2390233 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642566712 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_699462 |
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| Protein GI | 110801467 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAATA ATATAGGTAA AGTAGTTCAG GTTATTGGAC CAGTTGTAGA TATAAAATTT
GCAAATGATG AACTTCCTAA TATATTTAAT GCAATACACA TAAAAATGGA CGATGGAAAA
ATCTTAGTTT GTGAGGTAGA GCAACACGTA GGAGACGATA TAGTTAGAAC TATAGCTATG
GAAGCTACTG AAGGACTAAG AAGAGGTGTA GAAGCTGTTG ATACAGGAGC ACCTATATCA
GTACCAGTTG GTGAATGCGT ATTAGGAAGA ATATTTAACG TATTAGGTAA ACCACTAGAT
AGTGGAGCTG AAGTTAATAA CGAAGAAAAA TATCCAATTC ATAGACCAGC TCCATCATTT
GAAGAACAAT CAGTTGTTCC TCAAATGTTT GAGACAGGAA TAAAGGTTAT CGACCTTTTA
GCACCTTACC AAAGAGGAGG AAAAATAGGT CTATTTGGAG GTGCTGGTGT TGGTAAAACA
GTTCTTATAC AAGAGCTTAT AAACAACATA GCTAAAGAGC ACGGTGGACT TTCTGTATTC
ACAGGAGTTG GAGAAAGATC AAGAGAAGGT AATGACCTTT ACTATGAAAT GATGGAATCA
GGAGTTATAA AAAATACAGC ATTAGTATTT GGACAAATGA ACGAACCGCC TGGAGCAAGA
ATGAGAGTTG CCTTAACAGG ACTTACTATG GCTGAGTACT TCAGAGACCA AGGACAAGAT
GTGTTATTAT TCATAGATAA CATATTCAGA TTCTCACAAG CTGGATCAGA GGTTTCAGCT
TTATTAGGAA GAATACCATC AGCTGTTGGT TACCAACCAA CTCTTGCTAC AGAGATGGGA
GCTCTTCAAG AGAGAATCAC ATCAACTACT CATGGATCAA TTACATCAGT TCAAGCGGTA
TACGTACCAG CCGATGACTT AACTGACCCA GCTCCAGCTA CAACATTCAA CCACCTTGAT
GCTAAAACAG TTTTATCAAG AAGTATAGCT GAAATAGGTA TTTACCCAGC TGTTGATCCT
CTAGATTCTT CATCAAGAAT ATTAGACCCA AGAGTTGTTG GAGAAGAACA CTATGAAGTT
GCTTCGAAAG TTAAGCATAT ATTAGAAAGA TATAAAGAAC TTCAAGATAT CATCGCTATC
CTTGGTGTTG ATGAGCTTGC GGATGAAGAT AAATTAATAG TTGCTAGAGC AAGAAGAATA
CAAAAATTCT TATCACAACC ATTCACAGTA GCAGAGCAAT TTACTGGAAT GCAAGGTAGA
TATGTTCCAA TAAAAGAAAC TATAAGAGGT TTCAAAGAAA TATTAGAAGG TAAACATGAC
AATGTTCCTG AATCAGCTTT CTTATTTGTC GGAACAATAG AAGAAGTACT AGAAAAAGCT
AGAACAATGG CCCAATAA
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| Protein sequence | MSNNIGKVVQ VIGPVVDIKF ANDELPNIFN AIHIKMDDGK ILVCEVEQHV GDDIVRTIAM
EATEGLRRGV EAVDTGAPIS VPVGECVLGR IFNVLGKPLD SGAEVNNEEK YPIHRPAPSF
EEQSVVPQMF ETGIKVIDLL APYQRGGKIG LFGGAGVGKT VLIQELINNI AKEHGGLSVF
TGVGERSREG NDLYYEMMES GVIKNTALVF GQMNEPPGAR MRVALTGLTM AEYFRDQGQD
VLLFIDNIFR FSQAGSEVSA LLGRIPSAVG YQPTLATEMG ALQERITSTT HGSITSVQAV
YVPADDLTDP APATTFNHLD AKTVLSRSIA EIGIYPAVDP LDSSSRILDP RVVGEEHYEV
ASKVKHILER YKELQDIIAI LGVDELADED KLIVARARRI QKFLSQPFTV AEQFTGMQGR
YVPIKETIRG FKEILEGKHD NVPESAFLFV GTIEEVLEKA RTMAQ
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