Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2143 |
Symbol | |
ID | 4206381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2375503 |
End bp | 2377737 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642566693 |
Product | RecD/TraA family helicase |
Protein accession | YP_699450 |
Protein GI | 110803510 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTAT TAAATGGAAT AGTTGAGAGT ATAGTATTTA AAAGTTCGGA TACAGGGTAT ACAGTTATAA AATTTAGAGA AAATAATATT ATTCATACAG CAGTGGGAGT TTTACCACAT GTAAAAGAAG GTCAAAATTT AAAAATTACC GGAAGTTGGG TTAACCATTC ACAGTTTGGA AAACAATTTA AAGTAGAAGA ATGTGAAGAG ATATTACCTA CTTCAAAGGA TGGAATAGAA AAATATTTAT CTTCTGGGAT AATACAGGGG ATAGGACCTG TTACGGCAAA AAAAATTGTA AATAAATTTG GAGAAGATAC TCTTAATATT TTAGATAATA ATATTGAGAG ATTAAAAGAA ATAGAAGGAA TAGGTAAAAA GAAGTTAGAG ACCATAATTG AGTCTTATAG AGAACAAAGA GAATTAAAAA ATATAACTAT ATTTTTACAA ACCCATGGAT TAAGTGTAAA TCAGTGCTTG AAGATTTATA AAAAATATGG AGCTAGTTCA GTTGATACAG TTAAAAATAA TCCATATATA CTTTGTGATG AAATTTCAGG AATAGGATTT AAGACATCTG ACAAAATTGC TAGGAGTTTA GGGATAGAAA TTGATTCACC TTTTAGAATT CAAAGTGGTA TAAGATATGT AATAAATGAA TTTTGTACTA ATGGGCACAC ATTTATGCCA AAGGATGAAC TTATAAAGGA AGCAAGTAAT GTATTAACTG TAAGTGAAGA TATAATAGAA GAAAATATTA AAAATGCAGC TTTAGATAGA AAAATAAAGT TAGAGAAAGT TAATGATAAA GAAGGTGTTT TCACAATACC TAATTATTAT TGTGAGCTTG GAATAACTAA TAGGATTTTA ACTTTAGCTA TAAGCAATTT CCAAGATATA AGTGTAGATG TAGATCACCT AATACTTCAA TTTGAAAAGA AAAATAATAT AACTTTTGCA GAATCCCAGA AAGATGCTAT AATAAGTGCT TTTCAAAATG GAATAGAGAT AATAACTGGG GGACCAGGAA CAGGAAAGAC CACTATAATA AAGTGTATAA TTGAAATTTT TGAAACCTGT GGTTTGAAGG TTCTTTTGGG AGCACCTACT GGAAGAGCGG CTAAAAGAAT GAGTGAGTCT ACAGGAAAAG AAGCTACCAC AATACATAGA ATGCTTGACA TGGGAGTCTT TGAAAAAGAA GAAAGTGTTT TTGTAACCAA TGCAGAGGAA CATTCCTTAG AGGCTGATGT GGTTATAATA GATGAGGCAT CAATGATTGA TATAACTTTA ATGAATGCTT TACTTAAATC TATTAAGGTA GGTACTAGGC TTATAATAGT AGGAGATGTT GATCAGCTTC CATCAGTAGG AGCTGGAAAT GTATTAAATG ATTTTATAGA GAGTGGATTT ACAAAGGTTG TACGTCTAAA GGAAATATTT AGACAAGGAA AAGAGAGTAT GATTGTAGTA AATGCACATA AAATAAATAA AGGTGAGATG CCTAAGTTAA ATGAAAAAGG TACTGATTTC TTCTTCATAA GAAATGATAT TCAAGAAGGA ATATTAAATA CTATTATAGA TTTAATAAAT ACTAGGTTGC CTAGGTTTAA TTCAAATTGG GATAAGTTAA AAAGTATACA GGTTTTAGTT CCTATGAAAA AGGGTGTATT AGGAGTTACA AATTTAAATG AAAGAATTCA AAATGTCTTA AACCCAAAGG CTCCGTATAA AAAAGAAAAA GAATTTAGAA GTATGGTATT TAGAGAGGGA GATAAGGTTA TGCAGATAAA GAATAACTAC TCTCTAAAAT GGACCAGAAT AGCTGGAAAG GGTGACCATG AAGGTTTGGG TGTATTTAAT GGAGATATGG GATTTATAGA AAGTATAGAT TTAGAAGGGA AAAAACTATC TATAATCTTT GATGATGAAA GAAGAGTTAT TTATGATTTT ATTTATTTAG ATGAGTTAGA TTTGGCTTAT GCAATCACAA TACATAAAAG TCAAGGAAGT GAATTCCCTG TAGTAATAAT ACCTGCATAT ATGGGAGCAC CATTACTTAT GAATAGAAAT TTATTATATA CAGGAATAAC TAGGGCAAAA GAAATGGTTG TAGTAGTTGG AATACCTAAA GCATTAAAAT ACATGGTTGA TAATACAAGG AGTATGGAAC GCTATTCCTC TTTAAATTGG AGAATAAAAG AAGTAATATC TAATGAGGTT TTTGAACAAG ATTAA
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Protein sequence | MEVLNGIVES IVFKSSDTGY TVIKFRENNI IHTAVGVLPH VKEGQNLKIT GSWVNHSQFG KQFKVEECEE ILPTSKDGIE KYLSSGIIQG IGPVTAKKIV NKFGEDTLNI LDNNIERLKE IEGIGKKKLE TIIESYREQR ELKNITIFLQ THGLSVNQCL KIYKKYGASS VDTVKNNPYI LCDEISGIGF KTSDKIARSL GIEIDSPFRI QSGIRYVINE FCTNGHTFMP KDELIKEASN VLTVSEDIIE ENIKNAALDR KIKLEKVNDK EGVFTIPNYY CELGITNRIL TLAISNFQDI SVDVDHLILQ FEKKNNITFA ESQKDAIISA FQNGIEIITG GPGTGKTTII KCIIEIFETC GLKVLLGAPT GRAAKRMSES TGKEATTIHR MLDMGVFEKE ESVFVTNAEE HSLEADVVII DEASMIDITL MNALLKSIKV GTRLIIVGDV DQLPSVGAGN VLNDFIESGF TKVVRLKEIF RQGKESMIVV NAHKINKGEM PKLNEKGTDF FFIRNDIQEG ILNTIIDLIN TRLPRFNSNW DKLKSIQVLV PMKKGVLGVT NLNERIQNVL NPKAPYKKEK EFRSMVFREG DKVMQIKNNY SLKWTRIAGK GDHEGLGVFN GDMGFIESID LEGKKLSIIF DDERRVIYDF IYLDELDLAY AITIHKSQGS EFPVVIIPAY MGAPLLMNRN LLYTGITRAK EMVVVVGIPK ALKYMVDNTR SMERYSSLNW RIKEVISNEV FEQD
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