| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2136 |
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| Symbol | |
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| ID | 4205317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2364922 |
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| End bp | 2367084 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566686 |
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| Product | transcription accessory protein |
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| Protein accession | YP_699443 |
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| Protein GI | 110803195 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATA TAAATCATAT TTTATCAAAG GAACTTGGTA TTTCATTAAA ACAGGTAATA
AGTGTTATAG AAATGTTAGA TGAAGGAAAT ACAGTACCTT TCATAGCTAG ATATAGAAAA
GAAAGAACTG GTGGATTAAC AGATGAGGTT CTAAGAAAAT TTAATGAGAG ATTAACATAT
CTAAGAAATT TAGAAAGTAG AAAAGAAGAT GTTTTAAGAA TAATAGAGGA ACAAGAAAAA
TTAACTCCAG AATTAAAACT GAATATTGAG AAAGCTACTA CTCTTACTGA GGTTGAAGAT
ATATATAGAC CTTTTAAAGC TAAAAAGAGA ACAAGAGCTA CTATGGCTAT TGAAAAGGGA
TTAAAGCCAC TAGCTGAGCT TATTCTATCA GGAGAATTTA ATGGTGATAT AGTAGAAGAG
GCTAATAAAT ATATTAATGA AGAAAAAGGT GTTAAAAATG AAGAGGAAGC TCTTCAAGGG
GCTATGGATA TTATAAGTGA AATAATATCT GATAATGCTG ATTATAGAAA ATGGATTAGA
AATTTTGTTC AAAAGGATGG AATAATTCAG GTAAAAGGAA GCAGTGAAGA ACAAACACCT
TATGAAATGT ATTATGATTA TAAGGAACCT GTTAGAACAA TTCCATCTCA TAGAATATTA
GCTATAAATA GAGGAGAAAA GGAAAAAATT CTTTCTGTTA AAGTAACTTG TAATGATGAT
AAAATTATAG ATTATTTAAA TAAAAAAGTT TTAAAGGGAA ATAAAATTAC TGATAAGTAT
TTAGAAGAAA GTATAAAGGA CTCCTTTAAA AGACTTATAT ATCCTTCAAT AGAAAGGGAA
ATAAGAAGTG AGTTAACCTC TAAGGGAGAA GAGGGAGCCA TTGATATATT TAAGGCTAAT
TTAAAAGCTC TTTTAATGCA AGCGCCTATT AAGGGGAAAG TTGTAATGGG ATTTGACCCT
GGATTTAGAA CTGGATGTAA GGTTGCAATC TTAGACGAAA CAGGAAAATT TGTTGAGAAT
ACAACAGTTT ATCCAACAGC CCCTCAAAAT AGAATTGATG AAACAATAAG TACACTTAAA
AAACTTATTA AAAAACATGG AGTTCAAGTT ATTTCTTTAG GAAATGGAAC AGCTTCAAGA
GAATCAGAAG AAGTAATTGC AAAAATGCTT AAGGAAATAA AAGATGAAAC AGGAAAAGAG
TTATTCTATG TTATAGTTTC TGAGGCAGGA GCTTCTGTTT ATTCAGCATC AGAACTTGCA
AATAAGGAAT ATCCAGACTT AGATGTAACT GTAAGAGGCG CAATTTCTAT AGGAAGAAGA
CTTCAAGATC CATTAGCTGA GCTTGTTAAA ATAGATCCTA AGGCTATAGG AGTAGGACAA
TATCAACATG ATGTAACTCA GAAAAAACTT GATGAATCCT TAGCAGGGAT AGTTGAGGAT
TGTGTTAATA ATGTAGGAGT AGATTTAAAT ATAGCAACTC CATCACTATT AAGTTATATT
TCAGGTATAA ATGCTTCAAT AGCTAAAAAT ATTGTTGATT ATAGAGAAGA AAATGGTAAG
TTTAAAAGTA GAAAAGAACT TTTAAAAGTT AAAAGATTAG GACAAAAAGC TTATGAACAA
TGTGCAGGAT TCTTAAGAGT TATGGAAAGT AAAGAAGCTT TAGATAATAC CTCAGTTCAT
CCAGAGTCAT ATGGGGTAGC TAAGGAACTT ATAAAAACTT TAGGATATAC AGAAGAAGAT
TTAAAAAATG GCAAATTAGT AGATATAGAT GAGAGAGTAA AAGCAAAAGG AATTTCTAAC
TTAGCAAAAG AATTAGAAGT TGGAGAACCA ACACTTAATG ATATTATAAA GGAAATTAAA
AAGCCTGGAA GAGATCCAAG AGAGGAATTA CCTAAACCAA TATTTAAGTC TGGCGTAATA
GAAATGAAAG ATTTAAAACC AGGTATGATT TTAATGGGGA CAGTTAGAAA TGTATCTGAT
TTTGGTGCTT TTGTAGATAT TGGAGTTCAC CAAGATGGAT TAGTTCATAA GAGCCAAATG
GCAGATAGAT TTGTTAAACA TCCACTTGAT ATAGTTAAGG TTGGAGATAT AGTAGAAGTT
AGAATATTAG ATGTTGATTT AAAAAGAAAG AGAATTTCAT TATCAATGAA AAAAGAAGGT
TAA
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| Protein sequence | MDNINHILSK ELGISLKQVI SVIEMLDEGN TVPFIARYRK ERTGGLTDEV LRKFNERLTY
LRNLESRKED VLRIIEEQEK LTPELKLNIE KATTLTEVED IYRPFKAKKR TRATMAIEKG
LKPLAELILS GEFNGDIVEE ANKYINEEKG VKNEEEALQG AMDIISEIIS DNADYRKWIR
NFVQKDGIIQ VKGSSEEQTP YEMYYDYKEP VRTIPSHRIL AINRGEKEKI LSVKVTCNDD
KIIDYLNKKV LKGNKITDKY LEESIKDSFK RLIYPSIERE IRSELTSKGE EGAIDIFKAN
LKALLMQAPI KGKVVMGFDP GFRTGCKVAI LDETGKFVEN TTVYPTAPQN RIDETISTLK
KLIKKHGVQV ISLGNGTASR ESEEVIAKML KEIKDETGKE LFYVIVSEAG ASVYSASELA
NKEYPDLDVT VRGAISIGRR LQDPLAELVK IDPKAIGVGQ YQHDVTQKKL DESLAGIVED
CVNNVGVDLN IATPSLLSYI SGINASIAKN IVDYREENGK FKSRKELLKV KRLGQKAYEQ
CAGFLRVMES KEALDNTSVH PESYGVAKEL IKTLGYTEED LKNGKLVDID ERVKAKGISN
LAKELEVGEP TLNDIIKEIK KPGRDPREEL PKPIFKSGVI EMKDLKPGMI LMGTVRNVSD
FGAFVDIGVH QDGLVHKSQM ADRFVKHPLD IVKVGDIVEV RILDVDLKRK RISLSMKKEG
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