Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2117 |
Symbol | rpsA |
ID | 4205301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2345313 |
End bp | 2346449 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642566667 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_699426 |
Protein GI | 110802114 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA ATCTTACAAT GTCAGAATTA ATGGATAGCT TTGAGTTAAA GCATTTTCAT AAAGGTGAAA TAGTTAAAGG GAAAGTTATA AGCGTAAAGA ATGATGAAAT AATAGTTAAC ATTGGTCATT TTGCAGATGG TGTGGTACCA AGAAATGAAA TTTCAAATGA TAAGAATTTT GATATAAATT CAATAAATGT AGATGATGAT ATATTTGTAA TGGTATTAAG TGGAGATGAT GGAGAAGGAA ATGTTCTTCT ATCAAAGAAA AGAGCAGATG CAATAAAGGT TTGGGATGAT TTAAAAGAAG CATTTGAAAA AGAAAAATCA ATAAAAGTTT CCTTAAAAGA AGTTGTTAAA GGTGGAATAG TAGGAGATTT TAATGGTCTT AGAGTATTTA TGCCAGCTTC TCAATGTGCA GGAAGAAGAA TAGAGAATTT AGAAGAATTA GTAGGAAAAA CTTTAGAAGT TAGAGTTATA GAATTTAATA AAGAGAATAG AAAAGTTGTT GTTTCAAGAA GAATAATAGA TGAAGAAATA AGAAATAATG AAAAGAAAGC TCTTTGGTCT TCAATTAAAG AAGGAGAAAA AAGAAAGGGA AAAGTAACTA GGTTAGCTAA GTTTGGTGCT TTTGTTGATA TTGGTGGAGT AGAAGGATTA GTTCACTTAA GTGATATGTC ATGGTCAAGA GTTCATAAGC CAGAAGAGGT TGTATCAGTT GGAGATGAAG TAGAAGTATT TGTATCAGAA GTAGATATGG ATAGAGAGAG AATAGCACTT TCATTAAAAG ATGTTATTAA AAATCCATGG GAAACATTAG AAGGATTAAA AGTTGGTGAT GTTGTTTCAG GAAAAGTAAC TAATTTTATA AAGGTTGGAG CTTTTGTTGA AGTATTACCA GGAATAGAAG GATTAGTTCA TATTTCAGAA ATTACTGATG AAAATATAGC TAAGCCATCA GATATTTTAG AATTAGGCCA AGAAGTTAAG GTTAAAATCT TAAATATAGA TGATGAAAAC AAGAAAATGA GCTTAAGTAT AAAAGATGCT GTAGAAACTT CAAATGAATA TATACAGTAT AATGATGAAG AGGAAGGTTA TTCATTGGCT GATCTATTCA AAGGATTAAA TCTATAG
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Protein sequence | MSENLTMSEL MDSFELKHFH KGEIVKGKVI SVKNDEIIVN IGHFADGVVP RNEISNDKNF DINSINVDDD IFVMVLSGDD GEGNVLLSKK RADAIKVWDD LKEAFEKEKS IKVSLKEVVK GGIVGDFNGL RVFMPASQCA GRRIENLEEL VGKTLEVRVI EFNKENRKVV VSRRIIDEEI RNNEKKALWS SIKEGEKRKG KVTRLAKFGA FVDIGGVEGL VHLSDMSWSR VHKPEEVVSV GDEVEVFVSE VDMDRERIAL SLKDVIKNPW ETLEGLKVGD VVSGKVTNFI KVGAFVEVLP GIEGLVHISE ITDENIAKPS DILELGQEVK VKILNIDDEN KKMSLSIKDA VETSNEYIQY NDEEEGYSLA DLFKGLNL
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