Gene CPR_2111 details

Gene Information

• Locus tag: CPR_2111
• Symbol: radC
• ID: 4204368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2338477
• End bp: 2339160
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 642566661
• Product: DNA repair protein RadC
• Protein accession: YP_699420
• Protein GI: 110801616
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAA ATATAAAAAT TAATGAAATT CCATCTGGTG AAAGGCCAAG AGAAAAACTA 
CTTTTTTATG GAGCTCAGTG TTTATCTAAT GAAGAGCTTT TAGCTATAAT TCTTAGAACC 
GGAAATAAGG ATTCAAATGT AGTTGAATTG TCTTATAGAA TAATACATAG TGTTGGTGGA 
TTGAATGGAC TTTTTAAAGC TTCAGCAAAG GAGCTTATGG AGCTAAAGGG TGTTAAGGAA 
GCTAAGGCAA CTCAAATTTT AGCCATGTGT GAATTATATA AGAGATTTAA AGTTTCTGAG 
TTAACACAGA TTAAAATTTC AAAGCCATCA GATGTAGCAA AATTAGTTTT AGATGAACTT 
AGAATGCTAC GTCAGGAAGT GTTGATCCTA ATAAACCTTG ACACTAAAAA TAAAGTAATA 
TCTAAAAAAG AAATTTTTAA AGGTGGGCTA AATTCTTCTT TAGTACACCC AAGAGAGATA 
TTTAAAGAGG CTGTTAAAGA TAGTGCAGCG TCTATAATTA TATGTCACAA TCATCCTTCA 
GGAGACCCAA CACCTAGTAG AGATGATATA AACATAACAA CACGACTAAA AGAGTGTGGA 
AAAATGATGG GTATTGAGCT TTTAGATCAT TTAATAATAG GAGATAACAG ATTCATAAGT 
CTTAAAGAAA AAGACATATT ATGA 

 

Protein sequence

MSENIKINEI PSGERPREKL LFYGAQCLSN EELLAIILRT GNKDSNVVEL SYRIIHSVGG 
LNGLFKASAK ELMELKGVKE AKATQILAMC ELYKRFKVSE LTQIKISKPS DVAKLVLDEL 
RMLRQEVLIL INLDTKNKVI SKKEIFKGGL NSSLVHPREI FKEAVKDSAA SIIICHNHPS 
GDPTPSRDDI NITTRLKECG KMMGIELLDH LIIGDNRFIS LKEKDIL