Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2036 |
Symbol | recJ |
ID | 4205075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2248456 |
End bp | 2250234 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642566586 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_699345 |
Protein GI | 110803111 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGAGAGC AATGGCTACT TAAACAAAGA AAAAGAGATG AAATAGAAAA TTTAAAGGAA GAATTAAATA TAGATTTATT AACATCTATT CTTTTGGTGA ATAGAAATAT AAAAGATGAA AAAGATGCAC GTGAATTTTT ATTTGGTGGA ATTGAAAATT TAAATGACCC TTATCTTATG AAAGATATGG AGAAAGGGGT TAAAAGGGTA AAAGAAGCCA TAGAAAAGGG AGATAAAATA ACCATATATG GAGATTATGA TTGCGACGGT GTATCAAGCA CTTCAATTCT TTATAAAGGG TTAAAAAGAT GCAATGCTAA CTTTAATTAT CACATTCCAG ATAGGGAAGA TGAAGGGTAT GGTATGAATT CTAAGAGAGT TAAAATTTTA AATGAAGAAG GCACTAAGGT AATTTTAACT TGTGACAATG GAATAGCAGC CTTTGAAGAA ATAGATTTAG CTGAGAAATT AGGCATGGAT GTAATATTAA CAGATCATCA TGATATTCCT TTAGTTAAAG ATGAAAATGG AGAGATAAAT AAAGAAATTC CAAAGGCTTA TGCTGTTATA AATCCTAAAC AGGAAGACTG TAATTATCCA TTTAAATCCC TATGTGGAGC AGGAATTGCC TTTAAATTTA TATGTGCATT ATATAAGGAA CTAGGGATTC CACAGGAGGA AGCTTTAGAA TTATTAGAGA TTTGTGCCAT TGCTACTGTG TGTGATGTAG TTGATCTATT AGGCGAAAAT AGAATAATAG TAAAAAATGG TTTAGAAATG CTTAATAATA CTAAAAATAA GGGGTTAATA GCCTTAAAGA AATATACAGG TCTTGAGGGA AAGGAAATGG CACAATATCA TTTAGGATTT GTTATAGGCC CTTGTATAAA TGCTACTGGA AGACTTGAAA CAGCTGATTT ATCTGTTGAA TTGCTTTTAG CTGAAGATGA TGAAAGGGCA GATGCTTTAG CTAAGGAGCT TTTTGAACTT AATCAAAGAA GGCAGGAATT AACTAAAGAC AGCGTTGATA TGGTAATAAA GCAAATAGAA GATAATAATA TGGAAAATGA CAATGTTATT TTAGTTTATA ATCCTTATAT ACATGAAAGT ATTGCTGGAA TTGTAGCAGG GAGAATAAAA GAAAAATATA ATGTTCCTAC AATAATAATG ACTAAGGGAA AAGATATGCC TAAGGGATCT GCAAGGTCTA TAGAAGAATA TAATATTTTT GAGGAATTAT CAAAATGTAA AGAGCTAATA AGCAAATTTG GAGGACATCC AATGGCTGCG GGTTTATCTG TAGAAGAAAA AAACATACCT TTATTAAGAA ATATGTTATT AGAAAACTGT AAATTAACAG ATTATGATAT AATACCAAAG GTTAGAATAG ATGTTAAATT ACCTTTAGAA AGTTTAAATT ATGGATTAGT AGATAGTTTA GATAAGTTAG AACCCTTTGG AAAAGGAAAT TCTAGCCCGC TTTTTGGAGA GAAAGATGTT AAAGTAAGCA GGGTTTGGAT AATGGGAAAA GAGCAGAATG TAATTAAGTT TAGATGTAAA TTAAGAAATA GTTACAAAAC CATAGATGCC ATAGCCTTTG GAAATAAGGT TGAGGAATTT AAAGAAGATT TTGCTAATAA ATATGGAGAA GAGGAATTAT TAAGAGTATT AGATGGTGGA AACTGCAACT TTAGCATTGA TTTAATTTAT TACCCAAATA TAAATGAATT TAATGGGAAT AAATCTATTC AAGCTAATGT AAAATACTTT AGATTATAA
|
Protein sequence | MREQWLLKQR KRDEIENLKE ELNIDLLTSI LLVNRNIKDE KDAREFLFGG IENLNDPYLM KDMEKGVKRV KEAIEKGDKI TIYGDYDCDG VSSTSILYKG LKRCNANFNY HIPDREDEGY GMNSKRVKIL NEEGTKVILT CDNGIAAFEE IDLAEKLGMD VILTDHHDIP LVKDENGEIN KEIPKAYAVI NPKQEDCNYP FKSLCGAGIA FKFICALYKE LGIPQEEALE LLEICAIATV CDVVDLLGEN RIIVKNGLEM LNNTKNKGLI ALKKYTGLEG KEMAQYHLGF VIGPCINATG RLETADLSVE LLLAEDDERA DALAKELFEL NQRRQELTKD SVDMVIKQIE DNNMENDNVI LVYNPYIHES IAGIVAGRIK EKYNVPTIIM TKGKDMPKGS ARSIEEYNIF EELSKCKELI SKFGGHPMAA GLSVEEKNIP LLRNMLLENC KLTDYDIIPK VRIDVKLPLE SLNYGLVDSL DKLEPFGKGN SSPLFGEKDV KVSRVWIMGK EQNVIKFRCK LRNSYKTIDA IAFGNKVEEF KEDFANKYGE EELLRVLDGG NCNFSIDLIY YPNINEFNGN KSIQANVKYF RL
|
| |