| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2020 |
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| Symbol | sigF |
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| ID | 4206110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2226395 |
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| End bp | 2227150 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566570 |
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| Product | sporulation sigma factor SigF |
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| Protein accession | YP_699329 |
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| Protein GI | 110803821 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02885] RNA polymerase sigma-F factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATAA GTAGTATTGA GAAAGATAAT TTTAATTATG ACAAAAATAC AACTCTCATA
GTCATGGCTA AAGAAGGAAA TAAGGAAGCA ATGAATAAGC TTATAGAAGT TAATACTCCT
TTAGTTTCTT CAATATGCAA GAGATTTACA AATAGAGGTT ATGACTATGA GGATATATTT
CAGATTGGGT CAATGGGATT AGTTAAAGCT ATAAATAACT TTAATGATAG TTTTAATGTT
AAATTTTCAA CTTATGCTGT GCCTATGATT ATAGGTGAAA TAAAGAGATT TTTAAGGGAT
GATGGAATAA TAAAGGTAAG TAGAAGCACT AAGACTTTAG CTAAAAAGCT TCATTACAAT
AAGGAAGAAC TAATAAAAAA ATTAAATAGG GATCCTACTG TAGATGAATT AGCTGAATAC
TCTGGTGTTG ATAAGGAAGA GGTAATAGTA GCCTTAGAAT CAGCAAGTAG TATGCAATAT
CTATATGATA CTATACACCA TGATGAAGGA ACGCCGGTTC TCTTAATAGA TAAACTTAGT
GAGAAGGGTG AAGATGATGA CATGGTCAAT AAAATAGCTT TAAGAGAGGC TATTAGTTCA
TTAGATTCAA AGGGTAAACA AATCATAATG CTTAGGTATT TCAAGGATAA AACTCAAATT
CAAGTTGCAA AAATGCTTGG TATAAGTCAA GTTCAAGTTT CTAGAATAGA GAAAAAGGTA
CTAAAAATTA TGAAAGAAAA ACTAGAAGAG GATTGA
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| Protein sequence | MDISSIEKDN FNYDKNTTLI VMAKEGNKEA MNKLIEVNTP LVSSICKRFT NRGYDYEDIF
QIGSMGLVKA INNFNDSFNV KFSTYAVPMI IGEIKRFLRD DGIIKVSRST KTLAKKLHYN
KEELIKKLNR DPTVDELAEY SGVDKEEVIV ALESASSMQY LYDTIHHDEG TPVLLIDKLS
EKGEDDDMVN KIALREAISS LDSKGKQIIM LRYFKDKTQI QVAKMLGISQ VQVSRIEKKV
LKIMKEKLEE D
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