| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2013 |
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| Symbol | gpr |
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| ID | 4205316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2220001 |
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| End bp | 2220978 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642566563 |
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| Product | germination protease |
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| Protein accession | YP_699322 |
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| Protein GI | 110803194 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01441] GPR endopeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACAATG TAAGAACTGA TTTAGCTGTT GAAAGTAGAG AGATTTATAA ACATAGATAT
AATAGGGAAA TTGATGGGGT AGTTTTTGAA GAAAAGACTG TGGAAGAGGA TATTAAAGTT
ACAAATGTTG ACATATTAAA TGAGGAAGGC GCTAAAGCTA TGGAAAAACC TATAGGCAGA
TATGTTACCA TAGATATCCC TGATTACACT CATTATGACG GTGGCATAAT GGATGAGGTT
TCTCATGTGG TGGCAGCCTC CTTAGAAGAA CTTATTAATT TACCAGAGGA GAGAACGGCT
TTAGTAGTTG GGCTTGGAAA CTGGAATGTT ACACCTGACG CCATAGGTCC TAAGGTTGTG
GGAAAATTAA TGGTAACAAG ACATTTAAAG AAGGTTATGC CAGACATAAT AGATGATTCA
GTAAGACCAG TTTGCGCCAT AGCACCTGGA GTTTTAGGCA TAACAGGAAT TGAAACTGGA
GAGATAATAA AATCATTAGT GGAAAAAATA AAACCAGATT TAGTAGTTTG TATTGATGCC
TTAGCTTCAA GAAAACTAGA AAGAGTGGCT AGAACCATTC AAATAAGCAA TACTGGAATA
TCACCAGGGG CTGGAGTTGG AAATCATAGA ATGCAAATAA ATGAAGAAAG CTTAGGTATC
CCTGTTATTG CCTTAGGAGT ACCAACTGTT GTGGATGCAG CTACTATTGC AAATGATGCC
ATGGATTTAG TTTTAGATGA AATGATAAAT CAAGCAGATG CTGGCAAAGA GTTTTATAAT
ATATTAAATA ACATAGATAA GAATGAAAAG GGAATGATGA TAAAGAGCCT TTTAGATCCT
TATGTAGGAG ACTTAATGGT TACCCCAAAA GAAATAGACG ATATAATAGA GTCAGTTTCA
AAAATAATAG CAAATGGAAT TAATATAGCC CTTCAACCTA ATATGGTGTT AGAGGATATA
AATAAATTTT TAAACTAA
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| Protein sequence | MYNVRTDLAV ESREIYKHRY NREIDGVVFE EKTVEEDIKV TNVDILNEEG AKAMEKPIGR
YVTIDIPDYT HYDGGIMDEV SHVVAASLEE LINLPEERTA LVVGLGNWNV TPDAIGPKVV
GKLMVTRHLK KVMPDIIDDS VRPVCAIAPG VLGITGIETG EIIKSLVEKI KPDLVVCIDA
LASRKLERVA RTIQISNTGI SPGAGVGNHR MQINEESLGI PVIALGVPTV VDAATIANDA
MDLVLDEMIN QADAGKEFYN ILNNIDKNEK GMMIKSLLDP YVGDLMVTPK EIDDIIESVS
KIIANGINIA LQPNMVLEDI NKFLN
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