Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2010 |
Symbol | lepA |
ID | 4206567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2216427 |
End bp | 2218229 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642566560 |
Product | GTP-binding protein LepA |
Protein accession | YP_699319 |
Protein GI | 110801855 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA AGAAGTATAT AAGAAACTTT TCAATCGTAG CTCATATAGA TCATGGTAAA TCAACATTAG CAGATAGACT TTTAGAGAAA ACTGGAACAT TAACTCAAAG GGAAATGGAA CAGCAAGTAT TAGATACTAT GGAGCTTGAA AAAGAAAGAG GAATAACAAT AAAGTCTCAA GCAGCAAGAC TTATCTATAA GAGAGAGAAC GGCGAAGAAT ATATATTAAA TCTTATAGAT ACTCCAGGTC ATGTAGACTT TACATATGAG GTTTCAAGAA GTTTAGCAGC CTGTGAAGGT GCTATTCTTG TAGTAGACGC TACTCAAGGG ATACAAGCTC AAACTTTAGC AAACTGTTAC TTAGCATTAG ACAATGATTT AGAAATAGTA CCTGTTATAA ATAAGGTTGA CTTAGCTAGT GCTAGACCAG ATGAAATAAA GCAAGAAATA GAAGATGTTA TTGGAATAGA AGCAGAGGAT GCACCTTTAG TATCAGCTAA AACTGGATTA AACATAGAAG ATGTTTTAGA AGAGATAGTT GAAAAAATTC CAGCACCAGA GGGTGATGAA AATGCTCCAC TTAAGGCTTT AATATTTGAC TCATACTATG ATAGTTACAA AGGAGTTGTG TGTCATATAA GAGTTAAAGA TGGTAAAGTT AAGCCTGGAA CAAAAATTAA ACTAATGTCA ACAGACAAGG TTTATGAAGT AGTTGAAACT GGAGTATTTA CACCAGCTTT AATGCCTTTA AAAGAAGGAT TAAGTGCAGG GGAAGTTGGA TACATAACAG CTTCAATAAA GAATGTTAGA GATGCCAGAG TAGGTGATAC TGTAACAGAG GCAGCTAGAC CAACAGAGGA GGCATTACCA GGATATAAAC CAGCTATACC AATGGTTTAC TCAGGTATAT ACCCAGTTGA TGGAGCTAAG TATGAAGAAT TAAAAGAGGC ATTAGAAAAG CTTCAAATAA ATGATGCTGC ATTATCATTT GAACCGGAAA CATCAGTAGC TTTAGGATTT GGATTTAGAT GTGGATTCTT AGGATTATTA CACATGGAAA TAATTCAAGA GAGAGTTGAA AGAGAATTTA ACTTAGACAT AATTACAACT GCACCATCAG TTATATACAA AGTAACTAAG ACAAATGGAG AATCTTTTGA TTTAACAAAT CCAACAAACC TTCCTCCAAT GACAGAGATT GCATACATGG AAGAGCCTGT TGTTAAGGCT TCAATTATAA CTCCAACTGA TTACACTGGA GCTGTAATGG AATTATGCCA AGATAGAAGA GGTAAATTCA TAGATATGCA ATATTTAGAG GAAACAAGAG TTGTTATACA TTATGAAATT CCATTAAATG AAATAGTATA TGACTTCTTC GATACTCTTA AATCAAAAAC AAGAGGATAT GCTTCATTAG ATTATGAATT AAAAGGATAT GAGCAATCAA AACTTGTTAA GTTAGATATT TTATTAAATG GAGACAATGT AGATGCTTTA TCTATGATAG TTCCAGAAGT TAAGGCTTAT CAAAGAGGTA GAGCTATAGC TGAAAAACTT AAAGAAATAA TTCCAAGACA CATGTTTGAA GTTCCAATTC AAGCAGCTGT AGGTTCAAAA ATCATAGCTA GAGAAACTGT TAAAGCTATG AGAAAAGACG TATTAGCTAA GTGTTATGGT GGAGATATCT CAAGAAAGAA AAAACTTCTT GAAAAACAAA AAGAAGGTAA GAAGAGAATG AGACAATTAG GAACAGTTGA AGTTCCTCAA GAAGCATTCA TGTCAGTTTT AAAAGTTGAC TAA
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Protein sequence | MDKKKYIRNF SIVAHIDHGK STLADRLLEK TGTLTQREME QQVLDTMELE KERGITIKSQ AARLIYKREN GEEYILNLID TPGHVDFTYE VSRSLAACEG AILVVDATQG IQAQTLANCY LALDNDLEIV PVINKVDLAS ARPDEIKQEI EDVIGIEAED APLVSAKTGL NIEDVLEEIV EKIPAPEGDE NAPLKALIFD SYYDSYKGVV CHIRVKDGKV KPGTKIKLMS TDKVYEVVET GVFTPALMPL KEGLSAGEVG YITASIKNVR DARVGDTVTE AARPTEEALP GYKPAIPMVY SGIYPVDGAK YEELKEALEK LQINDAALSF EPETSVALGF GFRCGFLGLL HMEIIQERVE REFNLDIITT APSVIYKVTK TNGESFDLTN PTNLPPMTEI AYMEEPVVKA SIITPTDYTG AVMELCQDRR GKFIDMQYLE ETRVVIHYEI PLNEIVYDFF DTLKSKTRGY ASLDYELKGY EQSKLVKLDI LLNGDNVDAL SMIVPEVKAY QRGRAIAEKL KEIIPRHMFE VPIQAAVGSK IIARETVKAM RKDVLAKCYG GDISRKKKLL EKQKEGKKRM RQLGTVEVPQ EAFMSVLKVD
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