Gene CPR_2005 details

Gene Information

• Locus tag: CPR_2005
• Symbol: dnaK
• ID: 4205662
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2210616
• End bp: 2212475
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 642566555
• Product: molecular chaperone DnaK
• Protein accession: YP_699314
• Protein GI: 110802609
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAAA TAATCGGTAT AGATTTAGGA ACAACAAATT CATGCGTAGC TGTTATGGAA 
GGTGGAGAAC CAGTAGTTAT CACTAACTCA GAAGGTGCTA GAACAACTCC ATCAGTAGTT 
TCATTCCAAG CAAACGGAGA AAGATTAGTA GGTCAAGTTG CTAAAAGACA AGCAATAACA 
AATCCTGAAA AAACAATAAT GTCAATCAAA AGACATATGG GAACTGACTA TAAAGTTAAT 
ATAGATGGAA AAGATTATAC ACCACAAGAA ATATCAGCAA TGATACTTCA AAAATTAAAA 
GCAGATGCAG AAGCTTACTT AGGAGAAAAA GTAACAGAAG CTGTTATCAC AGTTCCAGCT 
TACTTCAATG ATGCTGAAAG ACAAGCAACT AAGGATGCTG GTAGAATCGC TGGTTTAGAT 
GTTAAGAGAA TAATAAACGA ACCAACAGCT GCATCATTAG CTTATGGATT AGATAAAATG 
GATAGTGCTC ACAAAATCTT AGTATATGAC CTAGGTGGTG GTACTTTCGA TGTATCTATC 
TTAGACTTAG GAGATGGAGT ATTTGAAGTT GTATCAACAA ACGGAGATGC TAGATTAGGT 
GGAGATGACT TCGACCAAAG AATTATAGAT TATATAGCAG AAGATTTTAA AGCTCAAAAT 
GGAATTGATT TAAGACAAGA TAAAATGGCT CTTCAAAGAT TAAAAGAAGC TGCTGAAAAA 
GCTAAAATTG AGTTATCATC ATCAACTCAA ACATTAATCA ACTTACCATT TATAACTGCT 
GATGCAACTG GTCCAAAACA CATAGATATG ACATTAACAA GAGCTAAATT CAATGAATTA 
ACTCATGACT TAGTTGAAAG AACAATAGAC ATAATGAAAG AAGCCTTAAA ATCAGGTAAT 
GTTTCATTAA ATGATATAGA TAAAGTAATC TTAGTTGGTG GATCAACAAG AATACCAGCA 
GTTCAAGAAG CTGTTAAAAA CTTTACTGGA AAAGAACCTT CAAAAGGAGT TAACCCAGAT 
GAGTGCGTAG CAATGGGTGC TGCTATCCAA GCTGGTGTAT TAACTGGTGA TGTTAAAGAT 
GTATTATTAT TAGATGTTAC TCCATTAACA TTAGGAATCG AAACTTTAGG AGGAGTTGCA 
ACTCCATTAA TCGAAAGAAA TACAACTATC CCTGCAAGAA AGAGCCAAAT ATTCTCAACT 
GCAGCAGATA ACCAAACTTC AGTTGAAATT CACGTAGTAC AAGGTGAAAG ACAAATGGCA 
GCTGATAACA AAACTTTAGG TAGATTTACT CTATCAGGAA TTGCTCCAGC TCCAAGAGGA 
ATCCCTCAAA TAGAAGTTGC TTTCGATATA GATGCTAACG GTATAGTTAA AGTTTCAGCA 
ACTGATAAAG CTACTGGAAA AGAAGCTAAC ATTACAATCA CAGCTTCAAC TAACTTAAGC 
GATGCTGAAA TAGATAAGGC TGTAAAAGAA GCAGAACAAT TTGCTGAAGA AGATAAGAAG 
AGAAAAGAAG CTATAGAAGT TAAAAATAAT GCTGAGCAAA TTGTTTACCA AACAGAAAAA 
ACTTTAAATG AACTTGGCGA TAAAGTTTCA GCTGAAGAAA AATCAGAAAT AGAAGCTAAA 
ATCGAAGAAG TTAAAAAAGT TAAAGATGGT GACGATATAG AAGCTATCAA GAAAGCTATG 
GAAGATTTAA CTCAAGCATT CTACAAAATA TCAGAAAAAT TATACCAACA AAATGGTGGA 
GCACAAGGTG AAGGGTTCGA TCCAAACAAC ATGGGTGGAG CTAATGCTGG AACAGGTGCT 
GCAAATAGCA ACGATGACAA TGTTGTAGAT GCTGATTTCG AAGTTCAAGA TGATAAATAA 

 

Protein sequence

MSKIIGIDLG TTNSCVAVME GGEPVVITNS EGARTTPSVV SFQANGERLV GQVAKRQAIT 
NPEKTIMSIK RHMGTDYKVN IDGKDYTPQE ISAMILQKLK ADAEAYLGEK VTEAVITVPA 
YFNDAERQAT KDAGRIAGLD VKRIINEPTA ASLAYGLDKM DSAHKILVYD LGGGTFDVSI 
LDLGDGVFEV VSTNGDARLG GDDFDQRIID YIAEDFKAQN GIDLRQDKMA LQRLKEAAEK 
AKIELSSSTQ TLINLPFITA DATGPKHIDM TLTRAKFNEL THDLVERTID IMKEALKSGN 
VSLNDIDKVI LVGGSTRIPA VQEAVKNFTG KEPSKGVNPD ECVAMGAAIQ AGVLTGDVKD 
VLLLDVTPLT LGIETLGGVA TPLIERNTTI PARKSQIFST AADNQTSVEI HVVQGERQMA 
ADNKTLGRFT LSGIAPAPRG IPQIEVAFDI DANGIVKVSA TDKATGKEAN ITITASTNLS 
DAEIDKAVKE AEQFAEEDKK RKEAIEVKNN AEQIVYQTEK TLNELGDKVS AEEKSEIEAK 
IEEVKKVKDG DDIEAIKKAM EDLTQAFYKI SEKLYQQNGG AQGEGFDPNN MGGANAGTGA 
ANSNDDNVVD ADFEVQDDK