Gene CPR_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2003 
Symbol 
ID4206164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp2208471 
End bp2209163 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content28% 
IMG OID642566553 
ProductABC transporter 
Protein accessionYP_699312 
Protein GI110803758 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAG TGGTTGGTGT TAAAAAGAAA TTTAGAAGAA AAAAAGTTTT AGAGAATATT 
ACTTTTAATG TAAAGAAGGG AGAAATAACT GCTTTACTAG GATTAAATGG AGTGGGAAAG 
TCTACTCTTT TAAAGATAAT TATGGGTCTT GTTAAGCAAG ATGAGGGGGA AGTACTTTTT 
AATGGAGAAA AGCTAAATTA TAAGACCTAT GAAAATATTG CATTTGTACC TGATGTTTTA 
AATACTTATG GTGACATGAA AATAAAAGAT GCCTTTGAAT ATATGAGTAT GATGTATGAA 
AAGTGGGATA TGGATAAAGC TTATGAAATG TTAAAAAATT TTAAATTAAC TGATGACTTA 
AAAATAAATA AACTTTCTAA GGGGAATATA GCAAGGGTAA AACTTATACT AGGTTTTGCT 
AGACACCCAG AATATTTACT TTTAGATGAA CCTTTTTCAG GTATAGATAT TTTTACAAGA 
GAGAAGTTTA TAGAATCTTT AATTGGTTAT ATGGATAATA ATATTGGAAT TTTACTAACA 
ACCCATGAAT TAAAAGAGGT TGAAAATATA GTTGATAAAG TTGTCTTTTT AAGTGATGGA 
AATATTAAAA TAGAATTTTA TGTTGAAGAT GTAAGAGAAA ATGAAGGGTT GTCAATGGTA 
GAGAAAATAA GGGAGGTACA TGAAGGTGAG TAA
 
Protein sequence
MIEVVGVKKK FRRKKVLENI TFNVKKGEIT ALLGLNGVGK STLLKIIMGL VKQDEGEVLF 
NGEKLNYKTY ENIAFVPDVL NTYGDMKIKD AFEYMSMMYE KWDMDKAYEM LKNFKLTDDL 
KINKLSKGNI ARVKLILGFA RHPEYLLLDE PFSGIDIFTR EKFIESLIGY MDNNIGILLT 
THELKEVENI VDKVVFLSDG NIKIEFYVED VRENEGLSMV EKIREVHEGE