| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1997 |
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| Symbol | |
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| ID | 4205634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2202859 |
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| End bp | 2204163 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642566547 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_699306 |
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| Protein GI | 110803412 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG CATTTGCTAC ACTAGGGTGT AGAGTTAATA CATATGAATC AGAAGCGATG
ACTGAAAAAT TTGTTAGGGA AGGCTATGAA GTTGTAGATT TTAATGAAAT GGCAGATGTG
TATGTAGTTA ATACTTGTAG CGTAACTAAC ATGGGAGATA AGAAATCAAG ACAAATAATA
GGAAGAGCTA GAAGACAAAA TCCAGAGGCT ATTATAGCTG TAGTTGGATG TTATGCTCAA
ATAGCACCTA CAGAGGTTTC AGGAATTGAA GGTGTAGATG TAGTTTTAGG TTCAAGAAAT
AAAGGTGAAA TAGTTTATTA TGTAAATAAG GCTAGAGATG AAGGCAAGCA ACAAGTTAAG
GTTGGCGCTG TTTTAAAGAA TAAAGTTTTT GAGGACCTAA AAATTGAAGA GTATAATAAT
AAAACTAGAG CTTTCTTAAA AATACAAGAT GGATGTAATA GATTCTGTGC TTATTGCTTA
ATTCCATATA CTAGGGGTTC TGTTTGTTCA AAAGACCCTA AGAAGGTTTT AGATGAAATA
AGAAGCTTAG CAGAGCATGG ATTTAAAGAA ATAATATTAT CAGGAATTCA TACAGCATCT
TATGGCGTTG ATTTAGATGA AAAAGTAACA TTAGTTGATT TACTAGAAGA GATAGAAAAA
ATCGATGGAA TAGAAAGAGT TAGAATAGGT TCAATAGACC CTACATTCTT TACAGAGGAT
GTTGTAAGAA GAATCTTAGC TCTTAAAAAA CTATGTCCTC ATTTCCACTT ATCACTTCAA
AGTGGATGTG ATGCTACTTT AAAAAGAATG AATAGAAGAT ACACTGCTAA AGAGTATGAA
GATATAGTAA ATCTTTTAAG AGATAAAATA GAAGATGTTT CTATAACAAC AGACGTAATT
GTTGGTTTCC CTGGAGAAAC TGATGAAGAG TTTAAAGAGA CTTATGAATT CTTAAAGAGA
ATAGCTCTTT CAAAAACTCA CATATTCAAA TATAGTCCTA GAAAAGGTAC TAGAGCAGAG
AATATGGAAA ATCAAGTTGA TGGAAATAAG AAAGACGAAA GAAGTAAAAA ACTTATTGAA
TTAAATAGAA TTAATGAAAA AGCCTTTGCT GAAAAATATA TAGGTGAAGT TATTGATGTT
TTATTTGAAG AAGAAGTTGA ATTAGGAAGT GGAGTTTACA CTGGATATAC AAGAAATTAT
ATAAAGGTAA ATGCCAAGGC TGATTGCAAC GTTTCAGGTA AAATATTAAA TGTAAAGATT
AATTCTTTTG AGGGAGAAGT AGCAGAGGGC GAAATAGTAT TATAA
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| Protein sequence | MKVAFATLGC RVNTYESEAM TEKFVREGYE VVDFNEMADV YVVNTCSVTN MGDKKSRQII
GRARRQNPEA IIAVVGCYAQ IAPTEVSGIE GVDVVLGSRN KGEIVYYVNK ARDEGKQQVK
VGAVLKNKVF EDLKIEEYNN KTRAFLKIQD GCNRFCAYCL IPYTRGSVCS KDPKKVLDEI
RSLAEHGFKE IILSGIHTAS YGVDLDEKVT LVDLLEEIEK IDGIERVRIG SIDPTFFTED
VVRRILALKK LCPHFHLSLQ SGCDATLKRM NRRYTAKEYE DIVNLLRDKI EDVSITTDVI
VGFPGETDEE FKETYEFLKR IALSKTHIFK YSPRKGTRAE NMENQVDGNK KDERSKKLIE
LNRINEKAFA EKYIGEVIDV LFEEEVELGS GVYTGYTRNY IKVNAKADCN VSGKILNVKI
NSFEGEVAEG EIVL
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