| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1988 |
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| Symbol | cdd |
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| ID | 4204570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2196240 |
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| End bp | 2196638 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642566538 |
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| Product | cytidine deaminase |
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| Protein accession | YP_699297 |
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| Protein GI | 110802418 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAG AACTTATAAA AAAAGCTTTA GAGGCAAGAG AATTGGCATA TTGTCCATAT
TCAAATTTTA AGGTAGGTGC AGCTGCTTTA TTTGAGGATG GTAAAATATA TACAGGATGC
AATATTGAAA ATGCATCATT TGGAGCAACA AACTGTGCTG AGAGAACTGC TATATTTAAA
GGGGTTTCAG AAGGTGCAAG AGTCTTAAAG GCTATGGCTT TAGTAGGAGA TTTAAATTCA
TACACATATC CATGTGGTAT ATGCAGACAA GTAATAGTAG AGTTTGCAGA AGATAAAGAT
ATAAAAATAT TCATAGTAAA AAGTGAAGAT GATTATATAG AGACAACATT AGATGAAATT
TTACCTGGAT CTTTTACTAA AAAGGATCTA GAAAAATAG
|
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| Protein sequence | MKKELIKKAL EARELAYCPY SNFKVGAAAL FEDGKIYTGC NIENASFGAT NCAERTAIFK
GVSEGARVLK AMALVGDLNS YTYPCGICRQ VIVEFAEDKD IKIFIVKSED DYIETTLDEI
LPGSFTKKDL EK
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