| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1972 |
|---|
| Symbol | |
|---|
| ID | 4204898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 2178621 |
|---|
| End bp | 2179409 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642566522 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_699281 |
|---|
| Protein GI | 110801947 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0327] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0200095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA ATGACATTAT AAATATAATA GAAGATATTG CCCCAGTTAA TTTAAAAGAA
GGCTTTGATA ATGTAGGCCT TATGGTTGGG GATAGAGAAA AAAATATAAC TAAGATTTTA
TTAGCTTTAG ATTGTACTGA AGAGGTTATT AAAGAGGCTA AGGAAATGGG TGCAGAGCTT
ATTTTAACTC ATCATCCACT TTTATTTAGA AAGCCAAGTA CAATAACAAC AGACACTCTA
TTAGGTAGAA AAATTATAAG CTTAATAAAA AATGATATAA ATCTTTATTC AGCGCACACT
AACTGGGACT CAGTTAAAGG TGGATTAAAT GATACCTTAG TTGAAATCTT AGGATTTAAT
AAAGGAATCA TAATGGATAA AAGCCCAGTT AATTCTCAGG CTGGAATTGG TAGAGTAGTA
GAGTTAACTA AGGAAATGAC TGTCCTAGAA ATAATAAACC TTATAAAATC ATCTTTAGGT
ATTAAGAATT TAAGATATGC AGGAGATTTA AATGAAGTTA TTAAGAAAAT TGCCATTGTA
AATGGTAGTG GGCAAGATTT CTTTGGAGAT GCAAAAAAAC TTGGAGCAGA TCTAATAATA
ACTGGAGATA CAACATATCA TTTTGTTTCA GATTATAAGG AAATGGGATT AAATATTCTA
GACATAGGAC ATTTTAATTC AGAGTGGCCT GTTTTAATTA AAGTAAGTGA AAAAGTAAAA
GAAAGATTAG ATTCAGATGT GGAATTTATT GTTTCAAAAG AGGCTAAAGA CCCCTTTGAA
TTCATATAA
|
|---|
| Protein sequence | MKLNDIINII EDIAPVNLKE GFDNVGLMVG DREKNITKIL LALDCTEEVI KEAKEMGAEL
ILTHHPLLFR KPSTITTDTL LGRKIISLIK NDINLYSAHT NWDSVKGGLN DTLVEILGFN
KGIIMDKSPV NSQAGIGRVV ELTKEMTVLE IINLIKSSLG IKNLRYAGDL NEVIKKIAIV
NGSGQDFFGD AKKLGADLII TGDTTYHFVS DYKEMGLNIL DIGHFNSEWP VLIKVSEKVK
ERLDSDVEFI VSKEAKDPFE FI
|
|---|
| |