| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1960 |
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| Symbol | |
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| ID | 4205933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2165071 |
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| End bp | 2165616 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566510 |
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| Product | secreted protein |
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| Protein accession | YP_699269 |
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| Protein GI | 110803993 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA TTATAAGGCT AGTTATAATT GTTTTAGCCA TATATTTACT ATTTTTAGGC
AGTGGATATA TATTAAAAAA TGTTATATTT CCACTAAAAT ATATGAATTA TGTAGAGAAA
TATAGTAAAG AGTATAATTT GGATCCTTAT TTTGTTATGG CGGTTATGAA AGCAGAAAGT
AACTTTGACG AAGATGCTAA ATCTAATAAG GATGCAAAAG GGCTTATGCA AATTACCACC
TCTACTGGAA AGTGGATAGC TGAAAAACAA GGGATTATTG ATTTTGATAC CAATTTATTA
TTAGAGCCAG AAGTTAATAT AAGGTTTGGA TGTTGGTATT TAAATAATCT TCATAAAGAG
TTTGGAGATT GGGACCTTGT AATTGCAGCT TACAATGCAG GAAGGGGACG GGTTCAAGAA
TGGCTTAATA GTAATGAACA TTCTAACGAT GGAAAAAATC TTACTTATAT ACCATTTAAA
GAAACTGATA AATATGTTAA AAAAGTAAAT GTTTATTACA ATATATATAG GTCACTTTAT
TCTTAA
|
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| Protein sequence | MKKIIRLVII VLAIYLLFLG SGYILKNVIF PLKYMNYVEK YSKEYNLDPY FVMAVMKAES
NFDEDAKSNK DAKGLMQITT STGKWIAEKQ GIIDFDTNLL LEPEVNIRFG CWYLNNLHKE
FGDWDLVIAA YNAGRGRVQE WLNSNEHSND GKNLTYIPFK ETDKYVKKVN VYYNIYRSLY
S
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