Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1956 |
Symbol | |
ID | 4204355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2161979 |
End bp | 2162905 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642566506 |
Product | alpha/beta fold family hydrolase |
Protein accession | YP_699266 |
Protein GI | 110801603 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.374782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTGA GAGAGAATTT TATATTTAAA GATGATGAAG GATTAGAATT ACAAGGATAT AAATGGAGTA ATTCTAAAGA ATTTAAGGCA GTTATTCACA TATTACATGG AATGACAGAG GATGCTATTA GATATGATGA ATTTGCAGAA AAACTTGTTG AAGCAGGATT TTTAGTTTAT GCCCATGACC ATAGAGGGCA TGGTTTTACA GCTAAAGATT TAGAATCTTT AGGATATCAA GCTGAAAATG ATGGTTTCCA ATGGATGATT GATGATACTA AAACTTTAAT AGAGTCTTCT AAAGAAAAAC ATAAAGGATA TAAAATAATA CTTTTTGGAC ATAGTATGGG ATCTTTTGTA AGTCAGAGGC TAGTTCAAGA ATATAATGAT TTAGTGGATG TGTTAGTTTT ATCAGGAACT AATGGTGAGC CAGATAAGTT AGCTCCACTT GGAGAATTTG TAGCTCAAGT AGAAATGTCA TTAAAGGGAA GAGAACATAA AAGTAAACTT ATGGACAAGT TGATTTTTGG AGGCTTTAAT AAGAATTTTA AACCAAATAG GACAGATTTT GATTGGCTTT GTAGTGTAGA AAGTGAAGTA GACAAGTATA TAGAAAATGA AAGATATGGT TTTATATGTT CAAGTTCCTT TTATTATGAT TTGTTAAGAG GGGTAAGAAG CATACATAAA GCTGAAAATA TGAATAGAAT AAACAAGGAT ATGCCTATTT ATATTTTTGG TGGAGATAAA GATCCAGTAG GGAATTTTGG TAAAGGTGTA ATAAACTTAA AAGATAAATT AGAAAAAGTA GGAGTAAAAA ATATTGAGTA TAAGCTATAT GAAAATGGAA GACATGAAAT GTTAAATGAA AAAAATAAAG TAGAAGTTAT GGAAGATACT ATTCAGTGGC TGTTGAAAAA TATTTAA
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Protein sequence | MDLRENFIFK DDEGLELQGY KWSNSKEFKA VIHILHGMTE DAIRYDEFAE KLVEAGFLVY AHDHRGHGFT AKDLESLGYQ AENDGFQWMI DDTKTLIESS KEKHKGYKII LFGHSMGSFV SQRLVQEYND LVDVLVLSGT NGEPDKLAPL GEFVAQVEMS LKGREHKSKL MDKLIFGGFN KNFKPNRTDF DWLCSVESEV DKYIENERYG FICSSSFYYD LLRGVRSIHK AENMNRINKD MPIYIFGGDK DPVGNFGKGV INLKDKLEKV GVKNIEYKLY ENGRHEMLNE KNKVEVMEDT IQWLLKNI
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