Gene CPR_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1956 
Symbol 
ID4204355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2161979 
End bp2162905 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content29% 
IMG OID642566506 
Productalpha/beta fold family hydrolase 
Protein accessionYP_699266 
Protein GI110801603 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.374782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGA GAGAGAATTT TATATTTAAA GATGATGAAG GATTAGAATT ACAAGGATAT 
AAATGGAGTA ATTCTAAAGA ATTTAAGGCA GTTATTCACA TATTACATGG AATGACAGAG
GATGCTATTA GATATGATGA ATTTGCAGAA AAACTTGTTG AAGCAGGATT TTTAGTTTAT
GCCCATGACC ATAGAGGGCA TGGTTTTACA GCTAAAGATT TAGAATCTTT AGGATATCAA
GCTGAAAATG ATGGTTTCCA ATGGATGATT GATGATACTA AAACTTTAAT AGAGTCTTCT
AAAGAAAAAC ATAAAGGATA TAAAATAATA CTTTTTGGAC ATAGTATGGG ATCTTTTGTA
AGTCAGAGGC TAGTTCAAGA ATATAATGAT TTAGTGGATG TGTTAGTTTT ATCAGGAACT
AATGGTGAGC CAGATAAGTT AGCTCCACTT GGAGAATTTG TAGCTCAAGT AGAAATGTCA
TTAAAGGGAA GAGAACATAA AAGTAAACTT ATGGACAAGT TGATTTTTGG AGGCTTTAAT
AAGAATTTTA AACCAAATAG GACAGATTTT GATTGGCTTT GTAGTGTAGA AAGTGAAGTA
GACAAGTATA TAGAAAATGA AAGATATGGT TTTATATGTT CAAGTTCCTT TTATTATGAT
TTGTTAAGAG GGGTAAGAAG CATACATAAA GCTGAAAATA TGAATAGAAT AAACAAGGAT
ATGCCTATTT ATATTTTTGG TGGAGATAAA GATCCAGTAG GGAATTTTGG TAAAGGTGTA
ATAAACTTAA AAGATAAATT AGAAAAAGTA GGAGTAAAAA ATATTGAGTA TAAGCTATAT
GAAAATGGAA GACATGAAAT GTTAAATGAA AAAAATAAAG TAGAAGTTAT GGAAGATACT
ATTCAGTGGC TGTTGAAAAA TATTTAA
 
Protein sequence
MDLRENFIFK DDEGLELQGY KWSNSKEFKA VIHILHGMTE DAIRYDEFAE KLVEAGFLVY 
AHDHRGHGFT AKDLESLGYQ AENDGFQWMI DDTKTLIESS KEKHKGYKII LFGHSMGSFV
SQRLVQEYND LVDVLVLSGT NGEPDKLAPL GEFVAQVEMS LKGREHKSKL MDKLIFGGFN
KNFKPNRTDF DWLCSVESEV DKYIENERYG FICSSSFYYD LLRGVRSIHK AENMNRINKD
MPIYIFGGDK DPVGNFGKGV INLKDKLEKV GVKNIEYKLY ENGRHEMLNE KNKVEVMEDT
IQWLLKNI