| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1950 |
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| Symbol | |
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| ID | 4206156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2152645 |
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| End bp | 2154807 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566500 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_699260 |
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| Protein GI | 110803750 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.419457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAGG TAATAATTGC AGAAAAACCA TCTGTTGCTA GAAATATTGC AGATGCTTTT
AATATAAAAA AGAGAAAAGA TGGATACTTT GAAGGCGAAG AATATCTTAT AACATGGGCT
TTCGGACACT TATTGCAGTT ATTTGATGCA AAGGATTATG ATGAGAACAT GAAGGGGTGG
AGAATGGAAA AATTCCCTTT TATCCCAGAA GTTTTTAGAT ATAAAATAAA ACAAGATTCT
TTAAATAGAA ACATCATTGA TAAGGGTGCG GAAAAGCAAA TAAAGATAAT AAAAGGTCTT
ATAGATAGAG AAGATGTAGA TGGAATAATT TCTGCTACTG ACTTTGATAG AGAGGGACAA
GTAATTGCAG ATGAAATTTT CCTATATTTT AGTGAAAAGA AACCTGTCTA TAGACTTTTA
TTAAATGAAT GGACACCAGA TGAAGTTAAA AAAGGAATGG AAAAGTTAAA ACCTAATGAA
GAAATGCAAT CCCTTCAAGA TGCTGGTATA GGAAGACAGT GGGCAGACTG GATAATAGGT
ATAAATTTAA CTTCTGTTAC TACAATAAAA TATAAGCTAA ATGATGGACA GATTTTAAAT
ATAGGGAGAG TTCTTCTACC TACTTTAAAA ATAATTTATG ACAGAGATAA AGAAATAGAG
AACTTTAAAT CAAGTGCATA TTACAAACTT AATGGTACTT TTAAGACTTC AAAAAATGAG
GAGTTTGAAG GAACTTATTA TGAAAATAAT TCAGAGAAGT TTGAAGATAA AAAGGTTTTA
GATGAGATTA AAGAAAAGAT AAAGGATAAA AATGCTGAAA TAATTGAAAA GCAAACAGAA
AGAAAAAAAG AATATCCACC ATTTTTATTT AATCTTTCTA ATCTTCAAGG ATATATAACA
AGTAAATACA AAGGATGGAC TTCAGATAAG GTTTTAAAAG TAGCTCAATC TTTATATGAA
AAGAAGTTTA TAACTTATCC TAGAACAGGA AGTATGGCTT TAGAGGAGAG CTTAGTTGAT
AGAACTAGAA ATGTTTTAGA AAAGCTTAAG GTAGGATTAC CTTATGAGGA GCAAATAAAG
TTTGTTCAAA ATAAAAGGGT TTTTGATAAT TCAAAGGTTG AGAGCCATAG TGCCATAGTT
CCAACTTACA TGAAACCTAA TAATTTAACT CAAGATGAGA GAATAGTTTA TACAGCAGTT
AAAAATAGAT TTATTATGCA ATTTATGCCT GTAGCTGAAT TTGAGGAAAC AAAAATAACT
TCCAAGGTAA ATGATAAAGA GGTTAAGGGT GTATTTATTT CAAAGGGAAA AGTTCAGCTT
GTAGAAGGAT GGAGAGTTGT TGAAAAAATA GATAGTAAAG ATACAATTCT TCCAATGGTA
AATGAAAAAG AAGTAGTAGA CTTAGTAGAT AGTAAAATAA ATAAGGTTAC TAAAAAACCA
CCTAAAAAGC ATACTGAGAA GACTTTACTT AGGGTTATGG AGACTTGTGG CAAGAGTTTT
AAAGAGGATG CAGAGGAAGA TAGTGAAGAA ATGATGGCTT CGATACTAAG TGGATTTAGT
ATAGGAACAC CTGCTACTAG AGCTGAAACA ATTAAAAAAC TTAAGGATGT AGGATATATT
ACTACAAAGG GAAAAAGTTT AACTTGTACA GAGCTTGGTA GAACAATTGT TGAAATATTC
CCTGTTAAGG AACTTTTAGA TTTAGAATAC ACAGGAAGAC TAGAAAAAAC CCTTTCAGAT
ATAGAAAGAG GGAAGGTTAA AAAAGAAGAT TTCTTAAATC TTATAAAAAA CTTTACTATA
GAGGGAGTTA AGGCTATAAA AAATGATGAT TCCATGGCAA AACACTTTAA AGTAGAGGCA
CCAGAGGGAG TAGAGGTTTT AGGAAAATGT CCTAACTGTG GAAATCCTGT TATAGAAGGA
GAAAGAGGAT TTGGATGTGT TAACTGGAAA AATGGATGTA AATATACCAT ATGGAAAAAT
GACAAGTATA TAGCTTCCTT TGGAAAACAA GTAACACCTC AGATGGTAAA ACTTCTATTA
GCTAATGGAA AAGTCGGATT TAGAAATTTA AAAAGTAAAA AGGGAAATAC CTTTGCAGCA
TACTTCATAT ATGAAAAAGA TGAAGAAAAA GGTTATTTCA CATGGAAAAT GGAATTTATT
TAA
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| Protein sequence | MKKVIIAEKP SVARNIADAF NIKKRKDGYF EGEEYLITWA FGHLLQLFDA KDYDENMKGW
RMEKFPFIPE VFRYKIKQDS LNRNIIDKGA EKQIKIIKGL IDREDVDGII SATDFDREGQ
VIADEIFLYF SEKKPVYRLL LNEWTPDEVK KGMEKLKPNE EMQSLQDAGI GRQWADWIIG
INLTSVTTIK YKLNDGQILN IGRVLLPTLK IIYDRDKEIE NFKSSAYYKL NGTFKTSKNE
EFEGTYYENN SEKFEDKKVL DEIKEKIKDK NAEIIEKQTE RKKEYPPFLF NLSNLQGYIT
SKYKGWTSDK VLKVAQSLYE KKFITYPRTG SMALEESLVD RTRNVLEKLK VGLPYEEQIK
FVQNKRVFDN SKVESHSAIV PTYMKPNNLT QDERIVYTAV KNRFIMQFMP VAEFEETKIT
SKVNDKEVKG VFISKGKVQL VEGWRVVEKI DSKDTILPMV NEKEVVDLVD SKINKVTKKP
PKKHTEKTLL RVMETCGKSF KEDAEEDSEE MMASILSGFS IGTPATRAET IKKLKDVGYI
TTKGKSLTCT ELGRTIVEIF PVKELLDLEY TGRLEKTLSD IERGKVKKED FLNLIKNFTI
EGVKAIKNDD SMAKHFKVEA PEGVEVLGKC PNCGNPVIEG ERGFGCVNWK NGCKYTIWKN
DKYIASFGKQ VTPQMVKLLL ANGKVGFRNL KSKKGNTFAA YFIYEKDEEK GYFTWKMEFI
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