| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1938 |
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| Symbol | |
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| ID | 4206194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 2142980 |
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| End bp | 2144062 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566488 |
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| Product | spermidine/putrescine-binding periplasmic protein precursor |
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| Protein accession | YP_699248 |
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| Protein GI | 110803710 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA AAAAATTTTT AGCATTAACT TGTTCAACAC TTCTTTTATC ATCTCTTTTT
CTTGGTTGTG GACCAAAAAA GGATGAGGAA GCTACTCAAG ATAAAAACAA TAACGTTCTT
TATGTTTATA ACTGGGGAGA TTACATAGAT CCAGAACTAC TTACTAAATT TAAAGAAGAA
ACTGGAATAG ATGTTAAGTA CGATGTTTAT GATACTAATG AAATAATGTA TCAAAAACTT
AATAGTGGTA ATGTATCTTA TGATATAGTA ATTCCTTCTG ATTACATGAT AGAAAAAATG
AAAGAAGAAG ATATGTTAGC TAAGATAGAT TATTCTAATA TTCCTAATTA TAAATATATA
GGAGAACAAT TTAAAAATTT AGCTTATGAT CCAACTAATG AATACTCAGT ACCATATATG
TGGGGAACAG TTGGAATAAT ATATAATACA AAGAAAGTTA GTGATCCTGT AGATAGTTGG
AATATCCTTT GGAACCCTAA ATATAAGGAT CAGGTTATAA TGCCAGATAG CGTTAGAGAT
GCTATGGCTG TTGCAGAAAA AAAATTAGGA TATTCATTAA ATACTGAAAA CTTAGATCAA
ATAGAAGCTG CTAAAAAGGA ACTTATGACT CAAAAAAAAG ATGGATTAAT CTTAGCTTAT
ATGGTTGACC AAGTTAAAGA TGCCATGGTT GGTGGAGAAG CTTCCCTTGC TGTTGCTTGG
TCTGGAGATG CTGTAACAAT GATAGAGAGA AATCCTGATT TAGCTTATGC TATTCCTAAG
GAAGGATCAA ATAAATGGTT TGATGCTATA GGAATTCCTA AAAATGCAAA GCATAAAGAA
AATGCTGAGA AGTTTATAAA CTTCCTTTGC GATTCTGAAA ATGCTGAGCA AAATGTAGAA
TATATAGGAT ACTCTACTCC AAACACAGCC GCATATGACC TTTTACCTGA GGATATAAGA
GATAATAAAG TTGCATATCC AGATAAAGAG TCATTAAAAA ATTGTGAGGT ATTTATAGAT
TTACCTTCTA AAATACTTAG AAAATATGAT GAAGCTTGGT TAGAAATCAA GTGTATTTAT
TAA
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| Protein sequence | MKLKKFLALT CSTLLLSSLF LGCGPKKDEE ATQDKNNNVL YVYNWGDYID PELLTKFKEE
TGIDVKYDVY DTNEIMYQKL NSGNVSYDIV IPSDYMIEKM KEEDMLAKID YSNIPNYKYI
GEQFKNLAYD PTNEYSVPYM WGTVGIIYNT KKVSDPVDSW NILWNPKYKD QVIMPDSVRD
AMAVAEKKLG YSLNTENLDQ IEAAKKELMT QKKDGLILAY MVDQVKDAMV GGEASLAVAW
SGDAVTMIER NPDLAYAIPK EGSNKWFDAI GIPKNAKHKE NAEKFINFLC DSENAEQNVE
YIGYSTPNTA AYDLLPEDIR DNKVAYPDKE SLKNCEVFID LPSKILRKYD EAWLEIKCIY
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