| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1936 |
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| Symbol | |
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| ID | 4206017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 2141339 |
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| End bp | 2142184 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642566486 |
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| Product | spermidine/putrescine ABC transporter, permease protein (potB)-like protein |
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| Protein accession | YP_699246 |
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| Protein GI | 110803883 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA GAAATAAGAA TTTATCATTT GCAGCTTATC CATACGTTTT ATGGAGTGCT
ATATTCATAG TTATCCCTTT GCTTTTAATA GTTTTCTTTA GTTTTACAAG TAAAGTTGAT
GGAAGATTTG TTTTCTCTTT TGAAAACTTC CAAAGATTAT TTGAGCCCAT ATATTTTACT
GTTTTTATAC GTTCTATATG GCTTGCTGTT TTATCAACAG TTTTATGTTT AATTTTAGGT
TATCCAATAG CTTATATGAT TTCTAAATTG CCTATAAAAA GAAGAAATAT GTTAATACTT
TTATTTATAT TACCAATGTG GATGAACTTC TTACTTAGAA CATATGCGTG GATGGCTATA
CTTGGTAGAG ATGGACTAAT TAATACTCTT TTAGGTTATA TAGGAATAGG TCCAATTAAA
ATGCTATATA CTGACGGAGC AATCTTACTT GGAATGGTAT ATAACTTCTT ACCATTTATG
GTTATACCAA TATATACTGT ACTTATAAAA ATTGATAAAA ACTTAGTTAA TGCAGCTTAT
GACTTAGGTG CAAATAAAGC CCAAGCTTTT AGAAAAGTTA TTTTACCACT TAGTATTCCT
GGAATAATCT CTGGAATAAC TATGGTATTT ATGCCAGCTG TTTCAAACTT CGTAATTCCA
AACCTTCTAG GTGGTGGAAA ATATATGTTA GTTGGTAACC TTATAGAACA ACAATTTACT
ACTATCGGTA ACTGGAACTT CGGTTCTGCT TTATCAATCT TTATGATGAT ATTAATACTA
ATTTCAATGG CATTTATGTC TAAATACGAA AAGAATGGAA AAGAAGGAGG TAAACAGCTA
TGGTAA
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| Protein sequence | MKNRNKNLSF AAYPYVLWSA IFIVIPLLLI VFFSFTSKVD GRFVFSFENF QRLFEPIYFT
VFIRSIWLAV LSTVLCLILG YPIAYMISKL PIKRRNMLIL LFILPMWMNF LLRTYAWMAI
LGRDGLINTL LGYIGIGPIK MLYTDGAILL GMVYNFLPFM VIPIYTVLIK IDKNLVNAAY
DLGANKAQAF RKVILPLSIP GIISGITMVF MPAVSNFVIP NLLGGGKYML VGNLIEQQFT
TIGNWNFGSA LSIFMMILIL ISMAFMSKYE KNGKEGGKQL W
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