| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1935 |
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| Symbol | |
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| ID | 4204216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 2140278 |
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| End bp | 2141336 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642566485 |
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| Product | spermidine/putrescine transport ATP-binding protein pota |
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| Protein accession | YP_699245 |
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| Protein GI | 110803305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.672597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTAGATT TGAAAGATAA TAATATTATT GAATTAAAAG GAATAACTAA ATCATATGGA
AAAGATACAA TTTTAGATAA TCTTTCCTTA AATATAAAAA AGAATGAATT CCTAACTCTT
TTAGGACCTA GTGGATGTGG TAAAACAACC ACTTTAAAAA TTATAGCTGG TTTTGAAACA
GCAGATAGTG GCCAGGTGGT CTTTGAAAAT AATATTATTA ACGATATACC ACCTTACGAA
AGACAATTAA ATACTGTATT CCAAAAATAT GCTCTGTTCC CTCATATGAA TGTGTATGAA
AATATAGCTT TTGGATTAAA ACTAAAAAAA ATTCCTAAAG ATATTATAGA TCAAAAGGTT
AAAGAAATGC TTAAATTGGT TGCCCTTGAA GGATATGAAA ATAGAGATAT TGAAGCCCTT
AGCGGTGGTC AACAACAAAG GGTTGCCATA GCTAGAGCTT TAGTAAATGA ACCAAAGGTA
CTTTTATTAG ATGAACCTTT AGGTGCATTA GATATGAAAC TTAGAAAAGA AATGCAAATA
GAACTTAAGA AAATCCAACA AAAATTAGGA ATTACATTTA TATTTGTAAC TCATGATCAA
GAAGAAGCTT TAACAATGTC AGATACAATA GTTGTTATGA ATAAAGGTGA AATTCAACAA
ATGGGAAGCC CTGAAGATAT ATATAATGAA CCTGCTAACT CATTTGTAGC AAAATTCATA
GGTGAAAGTA ATATAGTTGA TGGAATTATG TTAGATGACT TTAAGGTTGA ATTTGGTGGA
AAAATATTTG ACTGTGTTGA TAAAGGCTTT GAAAAGAATG AAGCTATTGA AGTTGTAATA
AGACCTGAAG ATTTTGAAAT GGTTAAATAT GAAAATGGTA TGTTAAAAGG AACTGTTACT
TCAATTATAT TTAAAGGTGT TCACTATGAA ATAGAAGTAA AGAATGAAAA TCACACTTGG
ATATTACACA ATACAAAACA TGCTGAAATA GGATCTAAAA TCGGATTATC GCTTGATCCA
GAAAGCATAC ACATAATGAA AAAAGAGAGT GATGTTTAA
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| Protein sequence | MLDLKDNNII ELKGITKSYG KDTILDNLSL NIKKNEFLTL LGPSGCGKTT TLKIIAGFET
ADSGQVVFEN NIINDIPPYE RQLNTVFQKY ALFPHMNVYE NIAFGLKLKK IPKDIIDQKV
KEMLKLVALE GYENRDIEAL SGGQQQRVAI ARALVNEPKV LLLDEPLGAL DMKLRKEMQI
ELKKIQQKLG ITFIFVTHDQ EEALTMSDTI VVMNKGEIQQ MGSPEDIYNE PANSFVAKFI
GESNIVDGIM LDDFKVEFGG KIFDCVDKGF EKNEAIEVVI RPEDFEMVKY ENGMLKGTVT
SIIFKGVHYE IEVKNENHTW ILHNTKHAEI GSKIGLSLDP ESIHIMKKES DV
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