| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1934 |
|---|
| Symbol | |
|---|
| ID | 4204626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 2139716 |
|---|
| End bp | 2140255 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642566484 |
|---|
| Product | DNA-binding protein |
|---|
| Protein accession | YP_699244 |
|---|
| Protein GI | 110802551 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAATAG GAGATAAAAT TAGACGTCTC AGAGTGGCCA AACAGTTAAC TCAAGAAGAA
TTAGCAAATA GATGTGAATT ATCTAAAGGA TTTATTTCTC AGCTTGAGAA TGACCTTACT
TCTCCATCTA TAGCTACATT AATAGATATA TTAGATATAT TAGGAACTAA TTTAACAGAA
TTCTTTAGTG AAGATACTAA TGAAAAAATA GCCTTCTCTA AGGATGATAT GTTTGAAACT
GAAAATGAAG AATTAAAATA TAACCTTATG TGGTTAGTTC CAAATGCCCA AAAGAATGAT
ATGGAACCTA TAATGATAAC TATTAAACCC GGAGGACAAT ATATTGAAGA AGAGCCTCAT
GAGGGTGAGG AATTTGGGTA TGTCCTATCT GGAGCAATAT ATCTTCATCT AGGAGAAAAA
AAAGTAAAAG TAAGAAAAGG CGAGAGTTTC TACTTTAAAC CCAAGGCTAA TCATTATATT
TCTAATGCAG GAAAAATTTC TGCAAAGGTT ATATGGATAA GTACTCCACC ATCATTTTAG
|
|---|
| Protein sequence | MEIGDKIRRL RVAKQLTQEE LANRCELSKG FISQLENDLT SPSIATLIDI LDILGTNLTE
FFSEDTNEKI AFSKDDMFET ENEELKYNLM WLVPNAQKND MEPIMITIKP GGQYIEEEPH
EGEEFGYVLS GAIYLHLGEK KVKVRKGESF YFKPKANHYI SNAGKISAKV IWISTPPSF
|
|---|
| |