Gene CPR_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1934 
Symbol 
ID4204626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2139716 
End bp2140255 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content32% 
IMG OID642566484 
ProductDNA-binding protein 
Protein accessionYP_699244 
Protein GI110802551 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAATAG GAGATAAAAT TAGACGTCTC AGAGTGGCCA AACAGTTAAC TCAAGAAGAA 
TTAGCAAATA GATGTGAATT ATCTAAAGGA TTTATTTCTC AGCTTGAGAA TGACCTTACT
TCTCCATCTA TAGCTACATT AATAGATATA TTAGATATAT TAGGAACTAA TTTAACAGAA
TTCTTTAGTG AAGATACTAA TGAAAAAATA GCCTTCTCTA AGGATGATAT GTTTGAAACT
GAAAATGAAG AATTAAAATA TAACCTTATG TGGTTAGTTC CAAATGCCCA AAAGAATGAT
ATGGAACCTA TAATGATAAC TATTAAACCC GGAGGACAAT ATATTGAAGA AGAGCCTCAT
GAGGGTGAGG AATTTGGGTA TGTCCTATCT GGAGCAATAT ATCTTCATCT AGGAGAAAAA
AAAGTAAAAG TAAGAAAAGG CGAGAGTTTC TACTTTAAAC CCAAGGCTAA TCATTATATT
TCTAATGCAG GAAAAATTTC TGCAAAGGTT ATATGGATAA GTACTCCACC ATCATTTTAG
 
Protein sequence
MEIGDKIRRL RVAKQLTQEE LANRCELSKG FISQLENDLT SPSIATLIDI LDILGTNLTE 
FFSEDTNEKI AFSKDDMFET ENEELKYNLM WLVPNAQKND MEPIMITIKP GGQYIEEEPH
EGEEFGYVLS GAIYLHLGEK KVKVRKGESF YFKPKANHYI SNAGKISAKV IWISTPPSF