Gene CPR_1928 details

Gene Information

• Locus tag: CPR_1928
• Symbol: hpt
• ID: 4204495
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 2132273
• End bp: 2132797
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 642566478
• Product: hypoxanthine phosphoribosyltransferase
• Protein accession: YP_699238
• Protein GI: 110803175
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0634] Hypoxanthine-guanine phosphoribosyltransferase
• TIGRFAM ID: [TIGR01203] hypoxanthine phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGATA AAAATAGAAA TTTACTAATT TCTGAAAATC AAATTAAAGA ACAAATAGCT 
ATTGTAGGTA AAAAAATAAC TGAAGATTAC AAAGATAAAA ACCTTTATGT TTTATCTCTA 
TTAAGAGGAA GTTTCATATT TACAGCGGAT TTAGTTAGAA CAATAGATAC TAAAACTCAA 
ATAGGATTTA TGACTACTTC AAGTTATGGC CATGGTGAAG AAAGTACTGG TATAGTTAAA 
GTTGTAAATG ATATTCCTGA TAATATTGAA GGCTTAGATG TCTTAATCGT TGATGATATC 
ATAGATTCAG GTATAACAAT GGATTTTGTT ATAAACCATG TTAAATCACT AGGAGCTAAA 
TCAGTTAAAA CTTGCACTCT TTTAGACAAA CCTTCTAGAA GAAAAGTTGA TTTAAAACCA 
GACTATTGTT GTTTTGAAAT AGAGGACTTA TTCGTTGTTG GTTACGGATT AAACTATGGT 
GATCACTATA GAAATATACC TTACATATTT AACTGGGAAA AATAA 

 

Protein sequence

MEDKNRNLLI SENQIKEQIA IVGKKITEDY KDKNLYVLSL LRGSFIFTAD LVRTIDTKTQ 
IGFMTTSSYG HGEESTGIVK VVNDIPDNIE GLDVLIVDDI IDSGITMDFV INHVKSLGAK 
SVKTCTLLDK PSRRKVDLKP DYCCFEIEDL FVVGYGLNYG DHYRNIPYIF NWEK