Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1917 |
Symbol | |
ID | 4205013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2115222 |
End bp | 2118749 |
Gene Length | 3528 bp |
Protein Length | 1175 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566467 |
Product | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein |
Protein accession | YP_699227 |
Protein GI | 110803262 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAGA AAGTAAGGGA TAAGAAATTT ACAGCATTAG CAGTTGCTAC TTCAATGATC TTTGGAATTA CAACACCGTT AACTACTGTA AAGGCTACTG AAAATTTAGC ACCGGAAAAC CTAGAGAAAA AAGGAGAAGA AGCTAGTTTA AAAAAAGAAG GAGATGTAAC TATTCAGATT TTAGGTACAT CAGACCTTCA TGGTAGATTT ATGAATTATG AGTATGCTCG TAATCAAAAA TCTGATGGTG GATTAAATCA AATATCCACA TTAGTTAATG AAGCTAGAAA GGAAAATCCT AATACAATAG TGGTTGATAA TGGAGATACT ATACAAGGGA ATTTTAATCA CTTATTTAAA AATGGTCCTA ATCCTATGGT TATGGGAATG AATGCTATAG GATATGATGT TTTCTCTTTA GGAAACCATG AATTTAACTA TGGAATGGAC AATCTTAATA ATGTTGTAAG TCAAGCTAAT GATAATTTAG ATGTATTATG TGCAAATCTT TATAAAGATG GTAAGAGGGT TTATGAAGGA TATACAACTA GAGAAATAGA AGGAGTTGAA GTTGCTTTAA TTGGAGTTGT AAGTCCTCAT ATAATGAAAT GGGATTCAGA AAATCTAAAA GGATATGAGG CTAAAAATCC TGCAGAAGAA GTTGGATTTG TAATAGATGA AATAGAAAAT AGACCTGAGG GTGGTGCTGA TGTTTATGCA GTAGTTTCAC ATGTGGGATT AGAAAGTGAA TATGGCAATG GAGATAGTGC TAGAGCCATA GCTGAAATGA ACCCAGAGGT ATCTGCCATA GTTGCAGGAC ATAGTCATAC TAATGTACCA GAAGAAAAAA TAAACAATGC AGTTATAAGT CAACCTACAA GTAATGGTCA AATGGTTTCT AAAATAGAAT TAACTGTTAG AAAAAATGGA GAAAAAGTAG AAGTTGTAGA TAAAAAGTCT AAATTATTAA GCACAAAGGG TGTAGCAGAG GATCAAAAAA TAAATGATTT ACTTACTGAT TTTCATAACA CAGCAATTGC TGATGCAACA GCACCTGTTG GCGAAATGGT TGGAGGAAAT CTTGCTGATA AAAATGAAAT AAAAGAAATT CCACAATCAT TAGTTGAAGA TCAAGGTATA ACTGACTTTA TAAATGAAGT TCAATTATAT AATAGTAGAA AGCATTTAGA ATCAAAGAAT ATAAATCCAG ATGAGGTTTA TATGGTTTCT GGAGCAGCTT TATTTAGTGC TTCATCAAAC TTATATGAAG GAAATATAAG CAAGGCAGAT ATTTCAAATA TTTATAGATA TGATAATAAA TTATATACTA TAAAAACAAA TGGAAAACAA CTTAAAAAGT ATATGGAAAA AAATGCTGAG TATTATAATA CTTATAAAGA TGGGGATTTA ACAGTATCTT TTAATGAAGA TGTTAGAATG TATTTATATG ACATGTTTGA TGGAATAAGT TATGAAATAA ATATATCTAA AGAGCCAGGT CAAAGAATTG AAAATTTAAA GTTTGAAAAA GATGGTAAGC CAGTTGAAGA CTCAGATGTA GTTTACTTAA CAGTAAATGA TTATAGATAT AATTCTGGAT TAGCTGCTGG AATAATGGAC CAAGGTGAGC ATGAGAAAAT ATATGATACA AATAATGATC AAATATCAGA TATGAGAGAT TTAATAGTTG ATTATATTCA AAATGTAAAA GGTGGAAAAA TCACTAAAAA AGTTAATAAT AACTGGAAGA TAACAGGTAA TGATTGGGAT TCAGAACAAA GAGAATTAGC TGTTAAACTT GTAAATGAAG GTAAAATAAA AATACCTGTA TCAGAAGATG GAAGAACTCC AAATGTAAAA GCTGTAACTT GGAATGATGT TTTAGAAGCT TTAGGAACTA AGGAAGTTGA AATACCAATA GTTACTTTCA ACGATTTCCA TGGATCTTTA GCAGAATCTA AGAGTGATGT TGGAGCAGCT AAGTTAGTTG GAGAAATAAA GAGAGTAAAA GAAGAAAATC CAAATACTGT AGTTGTTACA GGTGGAGATA TATATCAAGG AAGTGCTATG TCAAATCTTT TAAAAGGTGA GCCAGTTACT GCTATGCTTA AGGAAATGGG CTTAGAATTT TCAGCAGTTG GTAATCATGA GTTTGACTGG GGATATGAAT ATATACCAGA CTGGGCTAAA GCTGGAGAAT TTGATTTCTT AGCATCAAAT ATATATGAAA AAGAAACTGG AGAACCAGTT GAATGGGCTA AGCCTTATGG CGTTGTTGAA AGAGAAGGAA AGAAAGTTGG ATTTATAGGA CTTGCTACTC CTGAAACTGC ATACAAGACA AAGCCAGATA ACGTTTCTCA TTTAGAATTT AAAGATCCTG TAGAAGCAAC TAAGATTTGG GTAGATTATT TAGAAAATGA AGAAAATGTA GATGCCGTTG TTGTTTTAAG TCATTTAGGA AGTGAACAAA ATAGAGAGAC TGGAGAAATA ACTGGTGAGA TTGTTGAAGT TGCGGAAGTA CCAGGAGTTG ATGCTATAAT ATCAGCTCAT AGTCACCAAA AAGTTGAAGG AAAAGTTAAT GGAGTACCAG TTATACAAGC GTATAAAAAT GGTAGAAATT TAGGATATGT TAACTTAAAA TTTGACTATA AAGATGAATT AGTAGTTACA ACTAAACTTG ATGATATTTC TAAGAGAAAA GATACTCTTC CAGTTGATAA GAATATGAAA GATATATTAG CAAATTTTGA AGCTGATTTA GCTCCTATAA TGAATGAAAA AGTTGCTGAT TTATCAGTAG ATTTACCACA TGATAGAGAT ACTGGAGTAA GTCCTATGGG GGCTACTGTA ACTGAAACTA TGAGAAGAAT AGTTGATGCT GATATAGCAA TAACTAATGG TGGAGGAGTA AGAGCCCCAT TAATGGCTGG AACAGTTACT GTTGGAGATA TGTACACAAT ACTTCCATTT GATAATACTT TAATTACAAT GGAAATGAAA GGTTCAGATA TAATAAAAGT TTTAGAGCAT GGAATAGAAC CAGATAACTT TGGATGGGGA CAACATGCTG GTGTTAAACT TTGGTACACT CCAGGGGCTG AAAGAGGAGA AAAGATAACT TCTGTTAGAT TAGCTGATGG AACTAAATTA GAAAATGACA AGTATTATAA AGTAGTTACT AATGATTTCA TGGCTGTAGG TGGAGATTCT TATGATTTCT CAGCTGCTAA AAATGTAGTG GATACAAATT TAGTTATAAG AGATGAAATG GCAAATTATT GGAAAGAAAA TGGAATAGAT CCTATAACTG ATTTAGCTAC TTTATTAGAA GCTGGTGAAG ATACAACTGT CGATTTAGAA AAACCTGAAA ATCCAGGTAA CCCAGAAACA CCAGAAAATC CTGATAATGG TGAAAACTTA CCTAACACAG GTATGCCATT TGGAACCGGA GCAGTGGCTG CTATGGGTAC AGTATTAACA ATTGGTGGAC TAGCTGTATT AAGAAAGAAA AAGAATAATG CTGCATAA
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Protein sequence | MLKKVRDKKF TALAVATSMI FGITTPLTTV KATENLAPEN LEKKGEEASL KKEGDVTIQI LGTSDLHGRF MNYEYARNQK SDGGLNQIST LVNEARKENP NTIVVDNGDT IQGNFNHLFK NGPNPMVMGM NAIGYDVFSL GNHEFNYGMD NLNNVVSQAN DNLDVLCANL YKDGKRVYEG YTTREIEGVE VALIGVVSPH IMKWDSENLK GYEAKNPAEE VGFVIDEIEN RPEGGADVYA VVSHVGLESE YGNGDSARAI AEMNPEVSAI VAGHSHTNVP EEKINNAVIS QPTSNGQMVS KIELTVRKNG EKVEVVDKKS KLLSTKGVAE DQKINDLLTD FHNTAIADAT APVGEMVGGN LADKNEIKEI PQSLVEDQGI TDFINEVQLY NSRKHLESKN INPDEVYMVS GAALFSASSN LYEGNISKAD ISNIYRYDNK LYTIKTNGKQ LKKYMEKNAE YYNTYKDGDL TVSFNEDVRM YLYDMFDGIS YEINISKEPG QRIENLKFEK DGKPVEDSDV VYLTVNDYRY NSGLAAGIMD QGEHEKIYDT NNDQISDMRD LIVDYIQNVK GGKITKKVNN NWKITGNDWD SEQRELAVKL VNEGKIKIPV SEDGRTPNVK AVTWNDVLEA LGTKEVEIPI VTFNDFHGSL AESKSDVGAA KLVGEIKRVK EENPNTVVVT GGDIYQGSAM SNLLKGEPVT AMLKEMGLEF SAVGNHEFDW GYEYIPDWAK AGEFDFLASN IYEKETGEPV EWAKPYGVVE REGKKVGFIG LATPETAYKT KPDNVSHLEF KDPVEATKIW VDYLENEENV DAVVVLSHLG SEQNRETGEI TGEIVEVAEV PGVDAIISAH SHQKVEGKVN GVPVIQAYKN GRNLGYVNLK FDYKDELVVT TKLDDISKRK DTLPVDKNMK DILANFEADL APIMNEKVAD LSVDLPHDRD TGVSPMGATV TETMRRIVDA DIAITNGGGV RAPLMAGTVT VGDMYTILPF DNTLITMEMK GSDIIKVLEH GIEPDNFGWG QHAGVKLWYT PGAERGEKIT SVRLADGTKL ENDKYYKVVT NDFMAVGGDS YDFSAAKNVV DTNLVIRDEM ANYWKENGID PITDLATLLE AGEDTTVDLE KPENPGNPET PENPDNGENL PNTGMPFGTG AVAAMGTVLT IGGLAVLRKK KNNAA
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