Gene CPR_1915 details

Gene Information

• Locus tag: CPR_1915
• Symbol: ruvA
• ID: 4206461
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 2113649
• End bp: 2114254
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 642566465
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_699225
• Protein GI: 110801789
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGAAT ATATAAGAGG CCAATTTCAA GGGATAAGTA AGGATTATGT TGTAATAGAA 
TTAAATAATA TAGGATATAG AATTTTCACA TCTGGAAATA CAATGTCTAA TATGCCAAAA 
GTGGGAGATG AAGTTCTTCT ATATTTAGAG CAGATCGTTA GAGAAGATTT CATAGGTCTA 
TATGGATTTA CAACAAAAGA AGAATTAGAA ATGTTTAAGC TTTTATTATC CATAAATGGA 
GTAGGAGCAA AAGCTGCTTT ATCACTTTTA TCCATTAGTA CTGTTAATAA TTTAAAGTAC 
GCAATAATGA TGGGAGATGA AAAGCATATA ACAAGAGCAC CTGGAATAGG AAAGAAAACG 
GCTCAAAGAA TTATTCTAGA GCTTAAGGAT AAGTTAAAAC CAGATGAACT TACTTCTGAA 
GAGGAACAAT TAATAGAAGG AATTAATGAT AATTCTGATT ATAGTTTCAA TATAAATGAA 
ACATTAAGTG CCTTAATGGC ATTAGGCTAT ACAGAGAAGG AAGCTCAAAA AGCTTTAGAA 
AAAGTTGATA AGACATTATC TATAGAAAAT ATGATAAAGG AGTCTTTAAA ACTTTTAATG 
CGTTAG 

 

Protein sequence

MYEYIRGQFQ GISKDYVVIE LNNIGYRIFT SGNTMSNMPK VGDEVLLYLE QIVREDFIGL 
YGFTTKEELE MFKLLLSING VGAKAALSLL SISTVNNLKY AIMMGDEKHI TRAPGIGKKT 
AQRIILELKD KLKPDELTSE EEQLIEGIND NSDYSFNINE TLSALMALGY TEKEAQKALE 
KVDKTLSIEN MIKESLKLLM R